Gene RSc0503 details

Gene Information

• Locus tag: RSc0503
• Symbol: ruvC
• ID: 1219307
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: -
• Start bp: 537253
• End bp: 537798
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637236861
• Product: Holliday junction resolvase
• Protein accession: NP_518624
• Protein GI: 17545222
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.46163
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCATCC TCGGCATCGA CCCCGGCCTT CGCACCACCG GCTTCGGCGT GCTCGAGCGG 
CACGGCCACC AATTGGTCTA CGTCGCCTCG GGCACGATCA AGAGCGACGG CAACGCCGAC 
CTGCCCAGCC GCCTGAAGAC GCTGTACGAC GGCGTGTCGG AGCTGGTGCG CACCTACCGG 
CCGGATTGCG CCTCCATCGA AAAGGTGTTC GTCAACGTCA ACCCGCAGTC GACGCTGCTG 
CTGGGCCAGG CGCGCGGTGC AGTGATCTGC GGGCTGATGA GCGGCAACCT GCCGGTGTTC 
GAATACACCG CGCTGCAACT GAAGCAGGCC GTGGTCGGCT ACGGCCGCGC CAACAAGGAT 
CAGGTGCAGG ACATGGTGGT GCGCCTGCTC AACCTGGAAG GCCGGCCCGG CACCGATGCG 
GCCGACGCGC TGGGCGTGGC GATCTGCCAT GCGCACGGCG GCGAAACCCT GGCCGCCATG 
GCCGGACTGG CGCCGCAGCT GGCGCGCAAG GGCCTGCGCG TGCGGCGCGG CCGGCTGGTC 
GGCTAA 

 

Protein sequence

MRILGIDPGL RTTGFGVLER HGHQLVYVAS GTIKSDGNAD LPSRLKTLYD GVSELVRTYR 
PDCASIEKVF VNVNPQSTLL LGQARGAVIC GLMSGNLPVF EYTALQLKQA VVGYGRANKD 
QVQDMVVRLL NLEGRPGTDA ADALGVAICH AHGGETLAAM AGLAPQLARK GLRVRRGRLV 
G