More than 300 homologs were found in PanDaTox collection
for query gene Sama_3594 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008700  Sama_3594  response regulator receiver protein  100 
 
 		 376 aa  770    Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_1514  response regulator receiver protein  29.58 
 
 		 382 aa  155  1e-36  Shewanella woodyi ATCC 51908  Bacteria  normal  0.222117  hitchhiker  0.00633337 
 
 
-
 
NC_009831  Ssed_1383  response regulator  28.27 
 
 		 409 aa  145  1e-33  Shewanella sediminis HAW-EB3  Bacteria  normal  0.697135  normal  1 
 
 
-
 
NC_007298  Daro_3172  response regulator receiver  29.8 
 
 		 374 aa  136  5e-31  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_1181  response regulator receiver protein  27.86 
 
 		 364 aa  134  3.9999999999999996e-30  Shewanella sediminis HAW-EB3  Bacteria  normal  0.27125  normal  1 
 
 
-
 
NC_007298  Daro_0012  response regulator receiver  25.88 
 
 		 377 aa  132  9e-30  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0552217 
 
 
-
 
NC_008700  Sama_0909  response regulator receiver protein  25.34 
 
 		 364 aa  126  7e-28  Shewanella amazonensis SB2B  Bacteria  normal  0.0924607  normal  1 
 
 
-
 
NC_010506  Swoo_1276  response regulator receiver protein  26.16 
 
 		 364 aa  118  1.9999999999999998e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0129335  normal  0.0561968 
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  46.34 
 
 		 383 aa  116  5e-25  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  42.75 
 
 		 314 aa  115  2.0000000000000002e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_0836  response regulator receiver protein  46.4 
 
 		 395 aa  110  3e-23  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011728  BbuZS7_0421  response regulatory protein  42.31 
 
 		 305 aa  110  4.0000000000000004e-23  Borrelia burgdorferi ZS7  Bacteria  normal  0.972098  n/a   
 
 
-
 
NC_008009  Acid345_2946  response regulator receiver modulated serine phosphatase  44.09 
 
 		 384 aa  110  5e-23  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009092  Shew_1085  response regulator receiver protein  25.07 
 
 		 364 aa  109  6e-23  Shewanella loihica PV-4  Bacteria  normal  0.0724924  normal  0.0804122 
 
 
-
 
NC_004347  SO_0860  response regulator  42.45 
 
 		 339 aa  109  7.000000000000001e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012880  Dd703_3123  response regulator receiver modulated diguanylate cyclase  32.16 
 
 		 312 aa  109  7.000000000000001e-23  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  43.07 
 
 		 338 aa  109  8.000000000000001e-23  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  43.07 
 
 		 338 aa  109  8.000000000000001e-23  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  43.07 
 
 		 338 aa  109  8.000000000000001e-23  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  49.57 
 
 		 308 aa  108  1e-22  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  29.46 
 
 		 347 aa  108  2e-22  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  39.1 
 
 		 369 aa  108  2e-22  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.806511 
 
 
-
 
NC_012918  GM21_0360  response regulator receiver protein  38.32 
 
 		 204 aa  107  3e-22  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000726536 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  43.17 
 
 		 348 aa  107  3e-22  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_3702  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  47.66 
 
 		 863 aa  107  3e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.170309 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  43.17 
 
 		 348 aa  107  4e-22  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  38.99 
 
 		 333 aa  107  5e-22  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  42.4 
 
 		 338 aa  106  5e-22  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  42.4 
 
 		 338 aa  106  5e-22  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  42.4 
 
 		 338 aa  106  5e-22  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  42.4 
 
 		 338 aa  106  5e-22  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008554  Sfum_2303  response regulator receiver protein  38.04 
 
 		 227 aa  107  5e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  37.74 
 
 		 407 aa  106  6e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.142048 
 
 
-
 
NC_008609  Ppro_2062  response regulator receiver protein  35.43 
 
 		 217 aa  106  6e-22  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0378  response regulator receiver protein  38.32 
 
 		 204 aa  106  6e-22  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  43.88 
 
 		 350 aa  106  6e-22  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  41.61 
 
 		 339 aa  106  7e-22  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  41.61 
 
 		 338 aa  106  7e-22  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  39.74 
 
 		 378 aa  106  7e-22  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.215089 
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  43.8 
 
 		 308 aa  105  9e-22  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  44.62 
 
 		 346 aa  105  9e-22  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011729  PCC7424_5086  response regulator receiver modulated diguanylate cyclase  39.02 
 
 		 465 aa  105  1e-21  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  42.65 
 
 		 340 aa  105  1e-21  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.129077 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  41.5 
 
 		 337 aa  105  2e-21  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_007908  Rfer_2262  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  42.65 
 
 		 853 aa  104  2e-21  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  40.62 
 
 		 322 aa  104  2e-21  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_011138  MADE_00878  two-component response regulator  42.86 
 
 		 298 aa  104  2e-21  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  35.64 
 
 		 359 aa  104  2e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_1382  response regulator receiver protein  42.42 
 
 		 302 aa  103  3e-21  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_3382  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  36.53 
 
 		 594 aa  104  3e-21  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.371129 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  39.57 
 
 		 343 aa  103  3e-21  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.00000482447 
 
 
-
 
NC_011831  Cagg_1006  response regulator receiver modulated diguanylate cyclase  40.3 
 
 		 312 aa  103  5e-21  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  46.43 
 
 		 383 aa  103  6e-21  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_1496  multi-sensor signal transduction histidine kinase  38.14 
 
 		 679 aa  103  6e-21  Geobacter uraniireducens Rf4  Bacteria  normal  0.381542  n/a   
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  40.74 
 
 		 383 aa  103  7e-21  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  43.75 
 
 		 367 aa  102  7e-21  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  40.44 
 
 		 395 aa  103  7e-21  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  40.44 
 
 		 395 aa  103  7e-21  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal  1 
 
 
-
 
NC_011369  Rleg2_3066  two component transcriptional regulator, LuxR family  35.16 
 
 		 305 aa  102  8e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  46.43 
 
 		 383 aa  102  8e-21  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008709  Ping_2984  two component transcriptional regulator, LuxR family protein  42.86 
 
 		 295 aa  102  9e-21  Psychromonas ingrahamii 37  Bacteria  normal  0.43543  normal  0.546259 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  39.71 
 
 		 339 aa  102  1e-20  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  42.19 
 
 		 379 aa  102  1e-20  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  37.88 
 
 		 363 aa  102  1e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_2977  response regulator receiver domain-containing protein  40.13 
 
 		 303 aa  102  1e-20  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  0.13601 
 
 
-
 
NC_010512  Bcenmc03_6350  two component AraC family transcriptional regulator  36.72 
 
 		 271 aa  102  1e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.787195  normal  0.900493 
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  43.61 
 
 		 363 aa  102  1e-20  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_4003  response regulator  44.62 
 
 		 357 aa  101  2e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011757  Mchl_3692  two component transcriptional regulator, LuxR family  43.1 
 
 		 300 aa  101  2e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.170876  normal  1 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  40.44 
 
 		 377 aa  102  2e-20  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_010172  Mext_3383  response regulator receiver  43.1 
 
 		 300 aa  101  2e-20  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007952  Bxe_B1713  two component LuxR family transcriptional regulator  37.41 
 
 		 361 aa  101  2e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.310925  normal  1 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  38.62 
 
 		 338 aa  101  2e-20  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  42.31 
 
 		 365 aa  101  2e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0748941 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  37.7 
 
 		 331 aa  101  2e-20  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  44 
 
 		 358 aa  101  2e-20  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_1587  two component transcriptional regulator, LuxR family  34.29 
 
 		 292 aa  100  3e-20  Halothiobacillus neapolitanus c2  Bacteria  normal  0.522901  n/a   
 
 
-
 
NC_010725  Mpop_3574  two component transcriptional regulator, LuxR family  43.22 
 
 		 301 aa  100  3e-20  Methylobacterium populi BJ001  Bacteria  normal  0.0249095  normal  1 
 
 
-
 
NC_008392  Bamb_6368  two component AraC family transcriptional regulator  39.06 
 
 		 271 aa  100  3e-20  Burkholderia ambifaria AMMD  Bacteria  normal  0.434467  normal  1 
 
 
-
 
NC_007947  Mfla_1761  two component LuxR family transcriptional regulator  38.76 
 
 		 311 aa  100  4e-20  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010557  BamMC406_6071  two component AraC family transcriptional regulator  39.06 
 
 		 271 aa  100  4e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  32.67 
 
 		 319 aa  100  4e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_007509  Bcep18194_C7173  two component AraC family transcriptional regulator  36.25 
 
 		 268 aa  100  5e-20  Burkholderia sp. 383  Bacteria  normal  1  normal  0.495812 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  41.48 
 
 		 377 aa  100  5e-20  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_007298  Daro_1771  PAS:GGDEF  41.04 
 
 		 449 aa  100  6e-20  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  41.86 
 
 		 352 aa  99.8  8e-20  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  41.38 
 
 		 384 aa  99.8  8e-20  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal  1 
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  44.8 
 
 		 310 aa  99.8  8e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_008061  Bcen_3730  two component LuxR family transcriptional regulator  40.62 
 
 		 312 aa  99.8  8e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_4638  two component LuxR family transcriptional regulator  40.62 
 
 		 312 aa  99.8  8e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010515  Bcenmc03_5666  two component LuxR family transcriptional regulator  40.62 
 
 		 312 aa  99.4  9e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.917296 
 
 
-
 
NC_010505  Mrad2831_5514  two component LuxR family transcriptional regulator  43.59 
 
 		 305 aa  99.4  9e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.211273 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  35.98 
 
 		 397 aa  99  1e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.543575 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  44.26 
 
 		 328 aa  99  1e-19  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  41.1 
 
 		 331 aa  98.6  1e-19  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  34.66 
 
 		 349 aa  98.6  1e-19  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_2429  response regulator receiver modulated metal dependent phosphohydrolase  39.04 
 
 		 480 aa  99.4  1e-19  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.129673 
 
 
-
 
NC_012560  Avin_25160  response regulator  38.16 
 
 		 356 aa  99.4  1e-19  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  39.58 
 
 		 360 aa  98.2  2e-19  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013161  Cyan8802_1380  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  43.08 
 
 		 715 aa  98.6  2e-19  Cyanothece sp. PCC 8802  Bacteria  normal  0.923401  normal  1 
 
 
-
 
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