More than 300 homologs were found in PanDaTox collection
for query gene Daro_3172 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007298  Daro_3172  response regulator receiver  100 
 
 		 374 aa  765    Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_0012  response regulator receiver  36.36 
 
 		 377 aa  220  3e-56  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0552217 
 
 
-
 
NC_008700  Sama_0909  response regulator receiver protein  30.11 
 
 		 364 aa  166  5e-40  Shewanella amazonensis SB2B  Bacteria  normal  0.0924607  normal  1 
 
 
-
 
NC_010506  Swoo_1276  response regulator receiver protein  28.14 
 
 		 364 aa  166  6.9999999999999995e-40  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0129335  normal  0.0561968 
 
 
-
 
NC_009831  Ssed_1181  response regulator receiver protein  27.27 
 
 		 364 aa  159  5e-38  Shewanella sediminis HAW-EB3  Bacteria  normal  0.27125  normal  1 
 
 
-
 
NC_009092  Shew_1085  response regulator receiver protein  31.36 
 
 		 364 aa  153  5e-36  Shewanella loihica PV-4  Bacteria  normal  0.0724924  normal  0.0804122 
 
 
-
 
NC_010506  Swoo_1514  response regulator receiver protein  30.48 
 
 		 382 aa  142  9.999999999999999e-33  Shewanella woodyi ATCC 51908  Bacteria  normal  0.222117  hitchhiker  0.00633337 
 
 
-
 
NC_009831  Ssed_1383  response regulator  29.79 
 
 		 409 aa  140  3e-32  Shewanella sediminis HAW-EB3  Bacteria  normal  0.697135  normal  1 
 
 
-
 
NC_008700  Sama_3594  response regulator receiver protein  29.8 
 
 		 376 aa  136  5e-31  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007912  Sde_3110  response regulator receiver domain-containing protein  29.2 
 
 		 397 aa  97.8  3e-19  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  35.97 
 
 		 395 aa  96.3  8e-19  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  35.97 
 
 		 395 aa  96.3  8e-19  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal  1 
 
 
-
 
NC_008228  Patl_3669  diguanylate cyclase  40.2 
 
 		 300 aa  94.7  3e-18  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0119902  n/a   
 
 
-
 
NC_007413  Ava_0124  response regulator receiver Signal transduction histidine kinase  40.35 
 
 		 470 aa  93.6  5e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011728  BbuZS7_0421  response regulatory protein  29.44 
 
 		 305 aa  93.6  5e-18  Borrelia burgdorferi ZS7  Bacteria  normal  0.972098  n/a   
 
 
-
 
NC_011831  Cagg_1006  response regulator receiver modulated diguanylate cyclase  32.07 
 
 		 312 aa  93.2  6e-18  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_2947  multi-sensor signal transduction histidine kinase  41.23 
 
 		 503 aa  93.2  6e-18  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  36.84 
 
 		 337 aa  92.8  9e-18  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_014248  Aazo_5066  response regulator receiver modulated diguanylate cyclase  36.28 
 
 		 338 aa  92  1e-17  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_3302  two component transcriptional regulator  38.71 
 
 		 230 aa  91.3  2e-17  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.288231  normal  0.346827 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  36.5 
 
 		 437 aa  90.9  3e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  37.5 
 
 		 566 aa  91.3  3e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal  1 
 
 
-
 
NC_011891  A2cp1_2397  response regulator receiver modulated diguanylate cyclase  35.21 
 
 		 434 aa  90.9  3e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.593336  n/a   
 
 
-
 
NC_011145  AnaeK_2309  response regulator receiver modulated diguanylate cyclase  35.21 
 
 		 434 aa  90.9  3e-17  Anaeromyxobacter sp. K  Bacteria  normal  0.484645  n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  37.5 
 
 		 365 aa  90.5  4e-17  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  40.18 
 
 		 443 aa  90.1  5e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.394463 
 
 
-
 
NC_014248  Aazo_4225  multi-sensor hybrid histidine kinase  38.28 
 
 		 1322 aa  90.1  5e-17  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_1744  response regulator receiver modulated metal dependent phosphohydrolase  40.15 
 
 		 373 aa  90.1  5e-17  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  31.97 
 
 		 384 aa  90.1  6e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_009972  Haur_2699  response regulator receiver modulated metal dependent phosphohydrolase  40.16 
 
 		 328 aa  89.7  7e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_5086  response regulator receiver modulated diguanylate cyclase  35.16 
 
 		 465 aa  89.7  7e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  40.18 
 
 		 367 aa  89.4  9e-17  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013173  Dbac_2998  response regulator receiver protein  39.42 
 
 		 377 aa  89  1e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_007955  Mbur_0825  response regulator receiver  27.65 
 
 		 204 aa  88.6  1e-16  Methanococcoides burtonii DSM 6242  Archaea  normal  0.751719  n/a   
 
 
-
 
NC_008347  Mmar10_1277  response regulator receiver modulated diguanylate cyclase  38.98 
 
 		 454 aa  89  1e-16  Maricaulis maris MCS10  Bacteria  normal  0.410696  normal  0.0388481 
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  33.33 
 
 		 236 aa  89.4  1e-16  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_009092  Shew_3790  response regulator receiver modulated diguanylate cyclase  45.71 
 
 		 300 aa  88.6  2e-16  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1761  two component LuxR family transcriptional regulator  31.07 
 
 		 311 aa  88.2  2e-16  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_1496  multi-sensor signal transduction histidine kinase  36.75 
 
 		 679 aa  87.8  2e-16  Geobacter uraniireducens Rf4  Bacteria  normal  0.381542  n/a   
 
 
-
 
NC_008392  Bamb_6368  two component AraC family transcriptional regulator  40 
 
 		 271 aa  88.2  2e-16  Burkholderia ambifaria AMMD  Bacteria  normal  0.434467  normal  1 
 
 
-
 
NC_009719  Plav_2815  response regulator receiver modulated diguanylate cyclase  35.33 
 
 		 457 aa  88.2  2e-16  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.631579  normal  0.0857187 
 
 
-
 
NC_007412  Ava_C0163  multi-component transcriptional regulator  40.71 
 
 		 725 aa  87.8  3e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  0.892768  normal  1 
 
 
-
 
NC_012880  Dd703_3123  response regulator receiver modulated diguanylate cyclase  40.57 
 
 		 312 aa  87.8  3e-16  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_2062  response regulator receiver protein  42.73 
 
 		 217 aa  87.4  3e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  35.43 
 
 		 308 aa  87  4e-16  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010524  Lcho_3544  response regulator receiver modulated diguanylate cyclase  42.72 
 
 		 322 aa  87.4  4e-16  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0106122 
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  32.56 
 
 		 314 aa  87  4e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  35.43 
 
 		 308 aa  87  4e-16  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_6559  multi-sensor signal transduction histidine kinase  40 
 
 		 541 aa  86.7  6e-16  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.59439 
 
 
-
 
NC_011666  Msil_0424  response regulator receiver modulated diguanylate cyclase  36.54 
 
 		 469 aa  86.7  6e-16  Methylocella silvestris BL2  Bacteria  n/a    normal  0.97349 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  35.82 
 
 		 377 aa  86.7  6e-16  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.0516082 
 
 
-
 
NC_013422  Hneap_1587  two component transcriptional regulator, LuxR family  28.4 
 
 		 292 aa  86.7  7e-16  Halothiobacillus neapolitanus c2  Bacteria  normal  0.522901  n/a   
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  35.62 
 
 		 407 aa  86.3  8e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.142048 
 
 
-
 
NC_013173  Dbac_2855  response regulator receiver sensor signal transduction histidine kinase  40.31 
 
 		 348 aa  86.3  8e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_0863  response regulator receiver modulated metal dependent phosphohydrolase  36.76 
 
 		 351 aa  85.9  9e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.297515  normal  0.141829 
 
 
-
 
NC_013440  Hoch_0268  two component transcriptional regulator, winged helix family  38.21 
 
 		 227 aa  85.9  0.000000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.509377 
 
 
-
 
NC_009523  RoseRS_0195  two component transcriptional regulator  37.29 
 
 		 243 aa  85.5  0.000000000000001  Roseiflexus sp. RS-1  Bacteria  normal  1  hitchhiker  0.00716616 
 
 
-
 
NC_011146  Gbem_2494  PAS/PAC sensor hybrid histidine kinase  36.69 
 
 		 663 aa  85.9  0.000000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_4344  two component transcriptional regulator  37.29 
 
 		 239 aa  85.9  0.000000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.325933  normal  0.345767 
 
 
-
 
NC_010627  Bphy_7700  multi-sensor signal transduction histidine kinase  40.87 
 
 		 541 aa  85.5  0.000000000000001  Burkholderia phymatum STM815  Bacteria  normal  0.163324  normal  0.507763 
 
 
-
 
NC_013525  Tter_0789  response regulator receiver protein  36.84 
 
 		 278 aa  85.9  0.000000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012791  Vapar_4238  two component transcriptional regulator, LuxR family  39.13 
 
 		 356 aa  85.5  0.000000000000001  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_0356  response regulator receiver protein  39.82 
 
 		 121 aa  85.5  0.000000000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0780111  normal  0.957515 
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  40.77 
 
 		 237 aa  85.9  0.000000000000001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0959  response regulator receiver sensor signal transduction histidine kinase  38.06 
 
 		 372 aa  85.9  0.000000000000001  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  36.44 
 
 		 378 aa  85.9  0.000000000000001  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.215089 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  35.82 
 
 		 377 aa  85.1  0.000000000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  38.05 
 
 		 383 aa  85.1  0.000000000000002  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  37.31 
 
 		 353 aa  85.1  0.000000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_010557  BamMC406_6071  two component AraC family transcriptional regulator  39.17 
 
 		 271 aa  84.7  0.000000000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_1382  response regulator receiver protein  36.43 
 
 		 302 aa  85.1  0.000000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  33.07 
 
 		 363 aa  85.5  0.000000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0512  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 		 368 aa  84.7  0.000000000000002  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00189837  n/a   
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  40.35 
 
 		 452 aa  84.3  0.000000000000003  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_011729  PCC7424_1723  multi-component transcriptional regulator, winged helix family  35.4 
 
 		 597 aa  84.3  0.000000000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000000000776738 
 
 
-
 
NC_011832  Mpal_1331  multi-sensor signal transduction histidine kinase  33.85 
 
 		 576 aa  84  0.000000000000004  Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  1 
 
 
-
 
NC_014248  Aazo_1477  response regulator receiver modulated diguanylate cyclase  33.33 
 
 		 317 aa  84  0.000000000000004  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  34.88 
 
 		 301 aa  84  0.000000000000004  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_009972  Haur_2343  two component transcriptional regulator  36.75 
 
 		 243 aa  84  0.000000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00929975  n/a   
 
 
-
 
NC_009523  RoseRS_2694  putative PAS/PAC sensor protein  30.2 
 
 		 969 aa  84  0.000000000000004  Roseiflexus sp. RS-1  Bacteria  normal  0.0176534  normal  1 
 
 
-
 
NC_010506  Swoo_1513  response regulator receiver modulated diguanylate cyclase  35.21 
 
 		 301 aa  84  0.000000000000004  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.0153071 
 
 
-
 
NC_007413  Ava_1777  metal dependent phosphohydrolase, HD region with response regulator receiver modulation  36.96 
 
 		 414 aa  83.6  0.000000000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1740  two component transcriptional regulator, winged helix family  34.33 
 
 		 225 aa  83.6  0.000000000000005  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000204942  n/a   
 
 
-
 
NC_011726  PCC8801_0820  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  32.28 
 
 		 593 aa  84  0.000000000000005  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008578  Acel_1275  response regulator receiver modulated diguanylate cyclase  37.3 
 
 		 304 aa  83.6  0.000000000000005  Acidothermus cellulolyticus 11B  Bacteria  hitchhiker  0.00827298  normal  0.435617 
 
 
-
 
NC_008700  Sama_0065  response regulator receiver protein  39.26 
 
 		 305 aa  83.6  0.000000000000005  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013161  Cyan8802_0849  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  32.28 
 
 		 593 aa  84  0.000000000000005  Cyanothece sp. PCC 8802  Bacteria  normal  0.386146  normal  1 
 
 
-
 
NC_009092  Shew_0981  response regulator receiver protein  40.78 
 
 		 155 aa  83.6  0.000000000000006  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_29300  Response regulator  44.12 
 
 		 310 aa  83.6  0.000000000000006  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_2833  response regulator receiver modulated metal dependent phosphohydrolase  37.5 
 
 		 360 aa  83.2  0.000000000000006  Thauera sp. MZ1T  Bacteria  normal  0.809465  n/a   
 
 
-
 
NC_011884  Cyan7425_2941  multi-component transcriptional regulator, winged helix family  35.9 
 
 		 652 aa  83.6  0.000000000000006  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A0671  two component LuxR family transcriptional regulator  37.29 
 
 		 333 aa  83.6  0.000000000000006  Methylibium petroleiphilum PM1  Bacteria  normal  0.0205263  normal  1 
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  31.25 
 
 		 374 aa  83.2  0.000000000000007  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_0979  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  30.32 
 
 		 816 aa  83.2  0.000000000000007  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  43.14 
 
 		 383 aa  83.2  0.000000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  31.25 
 
 		 374 aa  83.2  0.000000000000007  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013161  Cyan8802_2067  response regulator receiver modulated diguanylate cyclase  35.09 
 
 		 317 aa  83.2  0.000000000000007  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  38.35 
 
 		 339 aa  83.2  0.000000000000007  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_011726  PCC8801_2041  response regulator receiver modulated diguanylate cyclase  35.09 
 
 		 317 aa  83.2  0.000000000000007  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  32.61 
 
 		 322 aa  83.2  0.000000000000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
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