| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1181 |
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| Symbol | |
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| ID | 5612317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1404834 |
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| End bp | 1405928 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932030 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001472920 |
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| Protein GI | 157374320 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.27125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGA TATTAGTTTG GATTGTAGAC GATGACGAGG ACTATTGCGA GCTTATTAAA
GAGGTGATCA TTGATGATTA CCGGGTTCAA GTATTTAATG AAGCCTACTC ATATCGAGAA
GCTTTAGAAT CGACCACACC AGATCTTGTA TTGATGGATA TTAACCTACC CGATATCAGC
GGAATCGAAC TCTGTCAGGA GCTGACTGCT TCGGGTAAAG ATACGGCGGT AATATTTGTG
TCAGGCATGA ATACTCTGGA GGAGCGTCTC AGGGCTTACG ATGTGAGTGC AGTTGATTTC
ATTGCTAAAC CTTTTGAGCT AAAGGAGCTG GTGGCTAAGG TTCAGGCTGT TGCATCATAT
CAGGCAAAAA AACGTTCCTT GGTGCAGGCC GAAACCATGT CACGAAACAT GGCATTTCAA
TCGATGACAG AGTCATCACA ATATGGTGCC GTGTTGCAGT TTTTCAGGCA GTGCTTCCTA
TGTCATGATT ATCAGAGTCT GGCGGATGCC TTTTTTGATT TGATGCAGCA ACTTAACTTA
AATACCTGTT TGGAGATCAG AGACGCAGAA GTGCATTATT TTGCGCCATC ACATGGGGAG
ATCAGCCCCA TCGAAGCCAA TATTCTTGAA CTTCTGGATA AGCATGGACG TTTATTTGAT
TTTGGTAGCA GGACTATCTG TAATGACAAA CATGTCTCTT TCTTGATAAA GAATATGCCA
TTGGATGATG AGGTCTTATA TGGCAGGTTA AGGGACATCA TTGCGGTTAT TGTAGAAGGA
CTGGAGGCGC GGGTGTTGGA TATTGGACGG CAGCAGACTC TGAAGCATGT CTTTATGGAG
ATCCAGGGGC TACTGGGGAA TATCAGTGGC GCAATTTTAG AGCATGATGA GAAATTCAGT
GCTGCCCTGA CAGGGATGAC AGCGGAGATC CGTACCAGTT TTCATGTTTT AGATATGACA
GAGGAGCAGG AGGATTACTT TGCATCTATG GTTGAAAGAA ACTTAAAAGA GGCCAATTCG
GCTGGTGAGG CTTTTTATCG CCTTCAGGGG TCATTGAATA CGGTTAAAAA TGTTGTTGAG
TCCAGCGTTT CTTAA
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| Protein sequence | MEEILVWIVD DDEDYCELIK EVIIDDYRVQ VFNEAYSYRE ALESTTPDLV LMDINLPDIS
GIELCQELTA SGKDTAVIFV SGMNTLEERL RAYDVSAVDF IAKPFELKEL VAKVQAVASY
QAKKRSLVQA ETMSRNMAFQ SMTESSQYGA VLQFFRQCFL CHDYQSLADA FFDLMQQLNL
NTCLEIRDAE VHYFAPSHGE ISPIEANILE LLDKHGRLFD FGSRTICNDK HVSFLIKNMP
LDDEVLYGRL RDIIAVIVEG LEARVLDIGR QQTLKHVFME IQGLLGNISG AILEHDEKFS
AALTGMTAEI RTSFHVLDMT EEQEDYFASM VERNLKEANS AGEAFYRLQG SLNTVKNVVE
SSVS
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