| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4344 |
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| Symbol | |
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| ID | 5541857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5595993 |
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| End bp | 5596712 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640896450 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001434386 |
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| Protein GI | 156744257 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.325933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.345767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAC TCAAAGACAA GCTGATCCTC GTCGTCGACG ACGAGCCGCG CATGGTCAAC
TTTATGCGCA TGAACCTGGA ACTCGAAGGA TGCCGGGTGG TCAGCGCCTC GAACGGGCGC
GAAGCGCTGG AAAAGGTGCG CGACGAGATG CCCGACGTGG TGTTGCTCGA TATTATGATG
CCGGTGATGG ATGGCTTTGA AACACTGCGC CGATTGCGAC AGGCATCATC GGTGCCGGTG
CTGGTACTGA CAGCGAAAGA TGACGAAGAG GATCGCATCA AAGGGCTGGA ACTGGGCGCC
GACGATTATA TCGGCAAACC GTTCAGTCAC CGGGAACTGG TCAGTCGCAT TCGCGCGGTT
CTACGGCGCC ACTACACCCC GCCGCCGGCG CCACAGACGC TGGTCAAGGT CGATGATCGG
CTCCAGATCG ATTTCGCCCG GCGCGAGGTG CTGGTCAATG GCGAACGGGT CAACCTGCGC
CCGACGGAGT ACCGGCTGCT GTACCACCTG GTGCAAAATG CGGGGTATGT GATGACCCAC
GAGCAACTGT TGAGTAAGGT GTGGGGACCT GAGTATCGCG ACGAGACGCA TTATTTGAGA
CTATACATCA CCTATCTGCG GCAGAAGATC GAGGAAGACC CGGCAAATCC AAAATATATC
CTGACCGAAC GCGGCATCGG GTATCGTTTC GTCGATTTCA AGCGCGAGGG GCACGGATGA
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| Protein sequence | MSELKDKLIL VVDDEPRMVN FMRMNLELEG CRVVSASNGR EALEKVRDEM PDVVLLDIMM
PVMDGFETLR RLRQASSVPV LVLTAKDDEE DRIKGLELGA DDYIGKPFSH RELVSRIRAV
LRRHYTPPPA PQTLVKVDDR LQIDFARREV LVNGERVNLR PTEYRLLYHL VQNAGYVMTH
EQLLSKVWGP EYRDETHYLR LYITYLRQKI EEDPANPKYI LTERGIGYRF VDFKREGHG
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