| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1740 |
|---|
| Symbol | |
|---|
| ID | 7258709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1868966 |
|---|
| End bp | 1869643 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643561642 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002458222 |
|---|
| Protein GI | 219667787 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000000204942 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA TTATGATTGT GGACGATGAC CCGACGATCC GGGAACTGGT CTGCACCCTT
CTCAAAAACG ACGGGTTTGC AACGTGTGAA GCCAGGGACG GGCGCGAGGC GCTGGAAAAA
ATAAGCGAAG CGAACCCCAG CCTGGCGGTG ATTGATCTGA TGATGCCGAA TATGGACGGT
TATGAGCTTT GCCGCCAACT GCGGCAGGGT TACAAAGATC TGCCCGTCCT GATGCTGACG
GCGAAACATG AAAAGCCCGC CAAAGTGAAA GGGTTTGAAG CCGGGACGGA CGATTATCTG
ACGAAACCCT TTGATGGGGA CGAACTGCTC CTGCGGGTCA AAGCGCTGAT GCGGCGCTAC
AGAATTGAAG CCTCCCAAAC CATTCAAATC GGTTATGTCA CCCTTGACAA AAACAGCTAT
TCCGTCATCC TCAACGGGGT GGGTGAGGAT ATTCCTATGA AGGAATTTGA GCTGCTGTTC
AAACTGGGAG GCTTTCCCGG ACGGACCTTT ACCCGGGACC AGCTCCTTGA AGGTGTGTGG
GGCTACGATT TTGACGGCAA TGAACGAACG CTGGATGTCC ACATTGGCCG TTTGCGCGAA
CGGTTCCCCG CCGAAAAATC CGGCTTCAAG ATTACCACCG TGCGGGGGTT GGGCTATCGG
CTGGAGGTGC AGGTATGA
|
|---|
| Protein sequence | MSKIMIVDDD PTIRELVCTL LKNDGFATCE ARDGREALEK ISEANPSLAV IDLMMPNMDG
YELCRQLRQG YKDLPVLMLT AKHEKPAKVK GFEAGTDDYL TKPFDGDELL LRVKALMRRY
RIEASQTIQI GYVTLDKNSY SVILNGVGED IPMKEFELLF KLGGFPGRTF TRDQLLEGVW
GYDFDGNERT LDVHIGRLRE RFPAEKSGFK ITTVRGLGYR LEVQV
|
|---|
| |