Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1276 |
Symbol | |
ID | 6115511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1617391 |
End bp | 1618485 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641632759 |
Product | response regulator receiver protein |
Protein accession | YP_001759663 |
Protein GI | 170725637 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0129335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0561968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACAAA TACGAGTATG GGTTGTCGAT GATGATCCGG ATTATTGTGA GTTGATATCT GAAGTGTTGA GTGATGATTA TCAGGTCACC CTCTTTAATG ATGCTAATTC ATATCGTACA GCGTTGGAGC TAGAGACACC TGAGCTTATT CTGATGGATA TCAATCTCCC TGATGTGAGT GGTATTGAGT TATGTCAGGA GTTGATGAAT TCAGGGAAAG ATGTGGCAGT CATTTTTGTG TCGGGCATGA ATACTCTCGA GGAGAGACTG AGGGCTTATG AGGTTAGCGC CGTTGACTTT ATCGCTAAAC CTTTCGAGCT CAAAGAACTT CAAGCAAAGG TGCAGGCGGT TGCTTCATAT CAAGCTAAGA AGCAATCTCT GGTTCAAGCT GAGTCTATGT CGAGAAATAT GGCGTTTCAA TCCATGACTG AGTCATCGCA ATATGGCGCT GTTTTGCAGT TCTTTAGACA GTGTTTTCTC TGTAATGATT ACCAGAGTTT AGCCGATGCT TTCTTTGAGT TGATGCAGCA GCTTAATCTC AGTACCTGTT TAGAGATCCG TGATATGGAG GTGCACTACT TTGCGCCCCA AAATGCAGAG ATCAGCCCAA TTGAAGCCAA TATTTTAGAG CTTCTTGATA AGCATGGTCG CCTATATGAT TTTGGCAGCC GAACCATATG TAATGATAAG CATGTTTCGT TTTTGATTAA AAATATGCCG ATGGATGATG AAGTTCTATA TGGGCGATTG CGGGATGTGA TTGCGGTTAT TGTTGAGGGG CTTGAGGCGC GCGTTATGGA TATCGGTCGT CAGAAAACCC TTGAACATGT TTTTAAAGAG ATCCAAGGGC TTTTAGGGAA CATCTCTGGT GCAATTGTTG AGCATGACCA AAAATTTAGT GCAGCTTTAA CCGGAGTAAC CACAGAGATC CGCAGTAGTT TTCATGTGTT AGATATGACG GAGGAGCAGG AGGATTACTT TGCATCTTTG GTGGAGAGAA ACCTGAAAGA AGCCAGTTCG GCGGGGGATG CATTTTATCG CCTACAGGGC TCCCTTAAAA CGGTCAGAAA CGTGGTTGAA TCGAGTGTCT CTTAA
|
Protein sequence | MAQIRVWVVD DDPDYCELIS EVLSDDYQVT LFNDANSYRT ALELETPELI LMDINLPDVS GIELCQELMN SGKDVAVIFV SGMNTLEERL RAYEVSAVDF IAKPFELKEL QAKVQAVASY QAKKQSLVQA ESMSRNMAFQ SMTESSQYGA VLQFFRQCFL CNDYQSLADA FFELMQQLNL STCLEIRDME VHYFAPQNAE ISPIEANILE LLDKHGRLYD FGSRTICNDK HVSFLIKNMP MDDEVLYGRL RDVIAVIVEG LEARVMDIGR QKTLEHVFKE IQGLLGNISG AIVEHDQKFS AALTGVTTEI RSSFHVLDMT EEQEDYFASL VERNLKEASS AGDAFYRLQG SLKTVRNVVE SSVS
|
| |