| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1085 |
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| Symbol | |
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| ID | 4922443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1250067 |
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| End bp | 1251161 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640162618 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001093215 |
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| Protein GI | 127512018 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0724924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0804122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAACA TGGAGATTTG GGTTGTAGAC GATGACAGGG ATTACTGCGA GTTGATCGTC
GAGATGTTGC AAGATGAGTT CAAGGTGAGC CCCTTCTATG GCGCGGCGGA TTTTCGCGTC
GCTCTGCAAA CCCAGAAGCC GGATCTGCTG CTGATGGATA TCAACCTGCC CGATACCGAT
GGCATCACCC TATGCCGTGA GCTACAGGCC AGCAACCAAG AGGTGGCCGT GCTGTTTGTC
TCTGGGATGA ATACCCTGGA GGAGCGTCTC AAGGCCTATG AGGTGAATGC GGTGGATTTC
ATCGCCAAGC CGTTTGAGCT CAAGGAGTTG CTGGCCAAGG TGCACAGCGT CGCTCACTAT
GTGATGAAGC AGCGGGAGCT GATCCAGGCG GAATCTGTCT CGCGCAACAT GGCCTTTCAG
TCGATGACTG AGTCGTCACA GTATGGCTGT GTGCTGCAGT TCTTCCGTCA ATGTTTTCTC
TGTAACGATC ATCAGACCCT AGCGGATGCC TTTTTTGACC TGATGCAGCA GCTTAATCTC
AACACCTGCC TGGAGATACG TGGGGAAAAC GTGGAGTATT TTGCTCCCAG GCATGCCGCC
ATCAGCCCCA TCGAGTCGAA TATTTTAGAG CTGCTGGATA AACATGGCCG CCTGTATGAT
TTTGGCTGCC GCACCATCTG CAACGACAAG CATGTCTCCT TCTTGATCAA GAATATGCCG
ATAAACGATG AGGTTCTCTA CGGCAGGCTG AGAGATATCA TCGCCGTGGT GGTCGAAGGG
CTGGAGGCGC GCGTCTTGGA TATCAGTCGA CAGCAGACGC TGACACAGGT GTTTCTCGAC
ATCGAATCGC TTATCGGCGA TATCAACGTC GCGACCCTAG AGCATGATGA GAAATTTAGT
GCGGCGCTCA TTAACATGAC CACAGAGATC CGTGGCAGCT TCCATGTGCT GGACATGACC
ATAGAGCAGG AAGATTATTT TACGGCGCTT ATCGAGCGTA ATCTGAAGGA GGTGAAATCG
GCCTCCGAGG CCTTTACCCG TCTGCAATCT GCGCTGGGCA AGGTGATGGA CGTGCTCGGG
GGAAGCGTAT CTTAA
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| Protein sequence | MNNMEIWVVD DDRDYCELIV EMLQDEFKVS PFYGAADFRV ALQTQKPDLL LMDINLPDTD
GITLCRELQA SNQEVAVLFV SGMNTLEERL KAYEVNAVDF IAKPFELKEL LAKVHSVAHY
VMKQRELIQA ESVSRNMAFQ SMTESSQYGC VLQFFRQCFL CNDHQTLADA FFDLMQQLNL
NTCLEIRGEN VEYFAPRHAA ISPIESNILE LLDKHGRLYD FGCRTICNDK HVSFLIKNMP
INDEVLYGRL RDIIAVVVEG LEARVLDISR QQTLTQVFLD IESLIGDINV ATLEHDEKFS
AALINMTTEI RGSFHVLDMT IEQEDYFTAL IERNLKEVKS ASEAFTRLQS ALGKVMDVLG
GSVS
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