Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1496 |
Symbol | |
ID | 5164471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 1742447 |
End bp | 1744486 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640548996 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001230268 |
Protein GI | 148263562 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.381542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAA ATAAAATCCT CATAGTCGAC GATCAGAAAT TCGCATTGCA AATGCTGCGG GACACCCTCG CCCCGCTGCA TTATGTCATC GAAGAGGCGA CCAACGGGGC TTCAGCAGTC TCGAAAGCCC AGGAATTCAT GCCGGACATT ATCCTGATGG ACCTGGTAAT GCCGGAGATG GACGGCGTTG AGGCCTGCAG GCGAATCAAA CAGGATATGC ACACTGCCAC GATTCCCGTG ATCGTGATTA CCGCCTCAAA AGAAAAGGAC AACCTCCTTG CGGCTTTCGC CGCCGGAATC GATGATTACA TCACCAAGCC TTTTTCCGAC AAGGAACTCC TGGCCAGGAT CCGCGCCAAC CTTTTCAAGC GTGAGGCCAT TGCCATGATG GAGCTGAAGA ATAAGGACGC GGAAACAGTC CTGGATATCT CACAAACTAT CACATCAACA CTCGACACCC GGGAAATCCT CCAGATCATC GTCAAGAAAA TTGCAGACCA CATTGAGGTC AAACGTTGTT CCATAGTAAA GTTTAGCGAA GAAGGGTACG GTTTTGTCCT GGCATCGAGC GACAACCCCT CAGCCAAGGG AATTCGCATT GAACTGTCAC GCTACCCGGA ACTCCTGGAA GTGATCCGCT CCCGCAAAGC CCTTGTTATC AGAGACGCCA AGCACCACCC GCTGCTCGAC GATGTCAAAA AATATATTTC GGATATCGAC CTGGACACGA TCCTGGTCGT CCCGATATTG TCTCAGAACG AGATAATCGG TTCTCTGATG GTCAGGACCA CCAACGACAG GAATTCATTC AGCAGCCGCG AACTCCGTTT CTGTCAACTG GTCGCCGATG CCTCGGCAAA TGCCATAAAA AACGCATCCC AGTTTAAAAA GGTTCTGGAA GAGTCCGATG AGCTGCGGGA AATAAAGGAG AAACTGGAAA AGGAGCTAGC GGAAAAAGCC GTTTACGAAA GTCTTTTCGA GCATGCATCG GAAGGACTCA TGGTTTTGAA TGCACGAGGA GAACCGGTAT ACGTCAACAG GAGCGCGCTC GACATCCTCG GCTACCAGCG GGACCAGATG CTGAAAATGA CGCTGACGGA CTTCCTGGCC GAGGAAAGCT TCCAGGTGGG GATGGAAAAC CATATGAACT TTTTCCTCGG TCGTAATTTC AGGAATAAGT ACGATCTCCT CTTTAAAACC AAATGCGGGG AAAAACGCTG CGTAGCGGTA TCTGTCAGCA ACTACCGCCT CGAAGGGAAC TATGCCATTC TCACGTTCAT GGATGTTACA GAGGAAAGAA GGGCGCAGCA TCAGCTGGCA GAGGCAAATG AACGGCTCAA GGGGGTCAAC CATCTAAAGT CGGAATTTAT CTATACCGCC ACCAACGACC TTCGCCTGCC GGTTGCCGTT ATCCACAGCA ACTGTTCGCA GCTCCGGGAT TCGGACACGA ACAACCTCAC CGAGATGCAG CGCGAGCATC TGGATTCCGC CATCGACAGC TGCGACCGCC TGATGGACCT CATTGAAGAA CTGCTCGACA ATTCCAATTT CGACTCCAGC GAACTGGAAC TATCATGTGA AGATAAAAAT ATCATGGAGT CTATCCAGGA AGTATACACG GTCCTCGCCC CATTCGCTTG GCAGCACGGC CTGCAAATGA GCGTAGAACC TTTGCAGGAC AATATCTCCG CGTTTTTTGA CAGCAAGAAA ATCCAATGCG TTCTGACCAA CCTGATCGGC AATGCCATCA AATTCACCCC CAGCGGCGGG AAAATCGGCA TTTCAGTTTC CGTCTGTGAT GAAGAACTTC TTGTTTCCGT TACGGACACC GGCGAGGGGA TTCCGGAAAA CTACATAACC AGGATATTCA ACGAATTCTA CCATCTGAAA TCCACTAACA GTTCCGCCAA GAAAGGGAGC GGCCTGGGCC TTGCCATCTG CAAGCGAATA GTCGACGCCC ATAGCGGCAG GATGTGGGTT GACAGCACTC TCAACCATGG AAGCACGTTC AGCTTTGCCC TCCCCTTATC CCGCTCATAA
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Protein sequence | MKANKILIVD DQKFALQMLR DTLAPLHYVI EEATNGASAV SKAQEFMPDI ILMDLVMPEM DGVEACRRIK QDMHTATIPV IVITASKEKD NLLAAFAAGI DDYITKPFSD KELLARIRAN LFKREAIAMM ELKNKDAETV LDISQTITST LDTREILQII VKKIADHIEV KRCSIVKFSE EGYGFVLASS DNPSAKGIRI ELSRYPELLE VIRSRKALVI RDAKHHPLLD DVKKYISDID LDTILVVPIL SQNEIIGSLM VRTTNDRNSF SSRELRFCQL VADASANAIK NASQFKKVLE ESDELREIKE KLEKELAEKA VYESLFEHAS EGLMVLNARG EPVYVNRSAL DILGYQRDQM LKMTLTDFLA EESFQVGMEN HMNFFLGRNF RNKYDLLFKT KCGEKRCVAV SVSNYRLEGN YAILTFMDVT EERRAQHQLA EANERLKGVN HLKSEFIYTA TNDLRLPVAV IHSNCSQLRD SDTNNLTEMQ REHLDSAIDS CDRLMDLIEE LLDNSNFDSS ELELSCEDKN IMESIQEVYT VLAPFAWQHG LQMSVEPLQD NISAFFDSKK IQCVLTNLIG NAIKFTPSGG KIGISVSVCD EELLVSVTDT GEGIPENYIT RIFNEFYHLK STNSSAKKGS GLGLAICKRI VDAHSGRMWV DSTLNHGSTF SFALPLSRS
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