More than 300 homologs were found in PanDaTox collection
for query gene Rru_A1053 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A1053  chemotaxis sensory transducer  100 
 
 
520 aa  1053    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.664914  n/a   
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  33.13 
 
 
965 aa  285  2.0000000000000002e-75  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_010725  Mpop_5021  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.43 
 
 
486 aa  247  4e-64  Methylobacterium populi BJ001  Bacteria  normal  0.608567  normal  0.875805 
 
 
-
 
NC_011757  Mchl_4968  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.16 
 
 
486 aa  244  3e-63  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.211446 
 
 
-
 
NC_010505  Mrad2831_0537  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.49 
 
 
486 aa  244  3e-63  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.208419  normal  0.912757 
 
 
-
 
NC_010172  Mext_4505  PAS sensor protein  42.16 
 
 
486 aa  244  3e-63  Methylobacterium extorquens PA1  Bacteria  normal  0.778246  normal 
 
 
-
 
NC_010511  M446_1380  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.62 
 
 
486 aa  241  2e-62  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.176314 
 
 
-
 
NC_010505  Mrad2831_0385  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.44 
 
 
486 aa  222  9.999999999999999e-57  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1819  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.99 
 
 
486 aa  220  6e-56  Methylobacterium sp. 4-46  Bacteria  normal  0.991546  normal  0.153854 
 
 
-
 
NC_010172  Mext_4764  chemotaxis sensory transducer  36.34 
 
 
416 aa  201  3e-50  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_5231  methyl-accepting chemotaxis sensory transducer  35.91 
 
 
416 aa  201  3e-50  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.544234  normal  0.123182 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  43.12 
 
 
565 aa  188  2e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_5306  methyl-accepting chemotaxis sensory transducer  36.6 
 
 
418 aa  188  2e-46  Methylobacterium populi BJ001  Bacteria  normal  0.0919893  normal  0.352041 
 
 
-
 
NC_007925  RPC_1710  methyl-accepting chemotaxis sensory transducer  42.45 
 
 
449 aa  185  2.0000000000000003e-45  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.140977  normal  0.0321459 
 
 
-
 
NC_010172  Mext_3616  chemotaxis sensory transducer  43.12 
 
 
305 aa  184  5.0000000000000004e-45  Methylobacterium extorquens PA1  Bacteria  normal  0.460138  normal 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  44.04 
 
 
608 aa  183  6e-45  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  43.43 
 
 
562 aa  182  1e-44  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  45.79 
 
 
561 aa  182  1e-44  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  45.79 
 
 
561 aa  182  1e-44  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_011757  Mchl_5373  methyl-accepting chemotaxis sensory transducer  44.2 
 
 
565 aa  182  2e-44  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.620524  normal  0.472724 
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  42.75 
 
 
565 aa  181  4e-44  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  43.48 
 
 
566 aa  180  4.999999999999999e-44  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3733  methyl-accepting chemotaxis sensory transducer  44.89 
 
 
558 aa  180  4.999999999999999e-44  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.152196  normal 
 
 
-
 
NC_010172  Mext_3424  chemotaxis sensory transducer  44.53 
 
 
558 aa  180  4.999999999999999e-44  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.574813 
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  42.39 
 
 
565 aa  179  1e-43  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  43.07 
 
 
562 aa  179  2e-43  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  40.94 
 
 
673 aa  177  4e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_010172  Mext_0191  chemotaxis sensory transducer  42.75 
 
 
565 aa  175  1.9999999999999998e-42  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.731843 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  40.19 
 
 
565 aa  174  2.9999999999999996e-42  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_007925  RPC_3476  methyl-accepting chemotaxis sensory transducer  43.84 
 
 
641 aa  174  2.9999999999999996e-42  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.640734  normal 
 
 
-
 
NC_010725  Mpop_0223  methyl-accepting chemotaxis sensory transducer  43.12 
 
 
565 aa  174  3.9999999999999995e-42  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  43.59 
 
 
561 aa  173  7.999999999999999e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0134  methyl-accepting chemotaxis sensory transducer  42.39 
 
 
565 aa  172  1e-41  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.150747 
 
 
-
 
NC_011004  Rpal_4064  methyl-accepting chemotaxis sensory transducer  44.16 
 
 
651 aa  172  1e-41  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
562 aa  172  2e-41  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  27.09 
 
 
678 aa  172  2e-41  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  42.49 
 
 
562 aa  171  3e-41  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_5878  methyl-accepting chemotaxis sensory transducer  42.03 
 
 
562 aa  171  3e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.338132 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  41.39 
 
 
565 aa  170  5e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.68 
 
 
558 aa  170  6e-41  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  42.34 
 
 
552 aa  169  8e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  40.58 
 
 
565 aa  169  1e-40  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_010725  Mpop_2047  methyl-accepting chemotaxis sensory transducer  42.7 
 
 
562 aa  169  1e-40  Methylobacterium populi BJ001  Bacteria  normal  normal  0.759486 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  45.79 
 
 
561 aa  169  1e-40  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_007778  RPB_1977  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
651 aa  169  1e-40  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.064764  normal 
 
 
-
 
NC_010172  Mext_2555  chemotaxis sensory transducer  42.96 
 
 
561 aa  169  1e-40  Methylobacterium extorquens PA1  Bacteria  normal  0.834906  normal 
 
 
-
 
NC_010725  Mpop_4549  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
561 aa  168  2e-40  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2023  methyl-accepting chemotaxis sensory transducer  32.91 
 
 
823 aa  168  2.9999999999999998e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0346871  n/a   
 
 
-
 
NC_010514  Mrad2831_6358  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.9 
 
 
490 aa  168  2.9999999999999998e-40  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_010172  Mext_0141  chemotaxis sensory transducer  44.57 
 
 
565 aa  167  2.9999999999999998e-40  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  40.22 
 
 
674 aa  167  4e-40  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  40.07 
 
 
672 aa  167  5e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0383  methyl-accepting chemotaxis sensory transducer  42.18 
 
 
559 aa  167  5.9999999999999996e-40  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.50218 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
566 aa  167  5.9999999999999996e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  41.73 
 
 
566 aa  167  5.9999999999999996e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_011757  Mchl_2346  methyl-accepting chemotaxis sensory transducer  42.34 
 
 
556 aa  166  1.0000000000000001e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.395485 
 
 
-
 
NC_011757  Mchl_2778  methyl-accepting chemotaxis sensory transducer  42.6 
 
 
558 aa  165  2.0000000000000002e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.060825  normal 
 
 
-
 
NC_007958  RPD_3409  chemotaxis sensory transducer  41.3 
 
 
651 aa  165  2.0000000000000002e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.304746  normal 
 
 
-
 
NC_010511  M446_2091  methyl-accepting chemotaxis sensory transducer  41.24 
 
 
562 aa  164  3e-39  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0245477 
 
 
-
 
NC_010172  Mext_2072  chemotaxis sensory transducer  41.97 
 
 
556 aa  164  3e-39  Methylobacterium extorquens PA1  Bacteria  normal  0.68132  normal  0.341201 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  38.63 
 
 
689 aa  164  4.0000000000000004e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  41.39 
 
 
730 aa  164  5.0000000000000005e-39  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  38.99 
 
 
560 aa  164  5.0000000000000005e-39  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_010505  Mrad2831_1766  methyl-accepting chemotaxis sensory transducer  40.51 
 
 
575 aa  163  7e-39  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  38.77 
 
 
569 aa  163  8.000000000000001e-39  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  38.77 
 
 
577 aa  163  8.000000000000001e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  40 
 
 
563 aa  162  9e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0741  methyl-accepting chemotaxis sensory transducer  44.04 
 
 
558 aa  162  1e-38  Methylobacterium populi BJ001  Bacteria  normal  0.532986  normal 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
567 aa  162  1e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  39.49 
 
 
667 aa  162  1e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_010511  M446_6675  methyl-accepting chemotaxis sensory transducer  43.48 
 
 
561 aa  161  2e-38  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.847881 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  40.51 
 
 
561 aa  162  2e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_010172  Mext_0707  chemotaxis sensory transducer  44.04 
 
 
565 aa  161  2e-38  Methylobacterium extorquens PA1  Bacteria  normal  0.440233  normal  0.156891 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  37.59 
 
 
688 aa  161  2e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.77 
 
 
564 aa  161  2e-38  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  38.69 
 
 
731 aa  161  3e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  40.37 
 
 
563 aa  160  3e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  39.56 
 
 
561 aa  161  3e-38  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  38.1 
 
 
561 aa  161  3e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  39.57 
 
 
566 aa  161  3e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  40.15 
 
 
691 aa  160  4e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_010725  Mpop_5403  methyl-accepting chemotaxis sensory transducer  40.66 
 
 
538 aa  160  5e-38  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  37.68 
 
 
670 aa  160  5e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  38.41 
 
 
655 aa  160  5e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.16 
 
 
561 aa  160  6e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  40.51 
 
 
691 aa  160  7e-38  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_011757  Mchl_4435  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
561 aa  160  7e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0198477  normal 
 
 
-
 
NC_007643  Rru_A0568  chemotaxis sensory transducer  41.09 
 
 
662 aa  160  8e-38  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
741 aa  159  8e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
562 aa  159  1e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_010725  Mpop_2032  methyl-accepting chemotaxis sensory transducer  41.24 
 
 
558 aa  159  1e-37  Methylobacterium populi BJ001  Bacteria  normal  normal  0.176129 
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
560 aa  159  1e-37  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_011757  Mchl_0720  methyl-accepting chemotaxis sensory transducer  43.68 
 
 
565 aa  159  1e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.605037  normal 
 
 
-
 
NC_010172  Mext_4068  chemotaxis sensory transducer  40.96 
 
 
591 aa  159  1e-37  Methylobacterium extorquens PA1  Bacteria  normal  0.269414  normal 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  39.93 
 
 
602 aa  159  1e-37  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0370  methyl-accepting chemotaxis sensory transducer  43.43 
 
 
560 aa  159  1e-37  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.52335 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  39.56 
 
 
564 aa  158  2e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  40.66 
 
 
556 aa  158  2e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  39.42 
 
 
572 aa  159  2e-37  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  37.91 
 
 
688 aa  158  2e-37  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
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