Gene Mpop_5306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5306 
Symbol 
ID6308721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5672639 
End bp5673895 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content70% 
IMG OID642653988 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001927934 
Protein GI188584489 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0919893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.352041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTC GTAGAGGCGC GGCCCGCTCA GCCGACGTCA GTCGCCACAA GCCGGAGGCA 
CATGACGCCC TCTCGGCGGA TTTCAAGGCG GTCTTCGACG CCTTGCCGGT CAACGTGCTC
GTGCTGCATC CGATCGAGGC GACGATCACC TTCGCCAACC GGCGCAGCGT CGAGACGCTT
CACACCCTCC GGACCTACCT GCCCCCCTCC GTGAATCCCG ACGCCATGGT CGGCCTCTCG
ATGGACGTGT TTCACAAGAA CCCGGCCCAC CAGCGCTCCA TCGTCGCCGA TCCGTCGCGC
CTGCCCTGGC GCACCAAGAT CCGCCTCGGA CCCAAGACCC TCGACCTCCA TGTCTCGCCC
GTGCGTGACG ACGATGGCCG CTACATCGCC GCGGTTCTGA CGTGGTCCGA CATGACGCCG
CTGACCGACT CGATCGCCAG CTTCGACGGG CTCATCAGCG CGGCACTGCG CGAGGCGGCG
GAGGCGACGG GCCTCATGCG GTCGGCGGCA GAGCGGGTGC TTTCGGCGAC CGACGCGACC
TCCCGCTCCG CGGACAGCGC CGCGTCCGGC GCGGCGGAGA CGACGACGAA CGTCCAGTCC
GTCGCCGCTG CGGTGGAGGA ACTCACCGCC TCGAACGGCG AGATCACCCG GCAGGTCAAC
CGCACCAGTA CGGCGACCGG GCAGGCGGTG ACCGAGGCCG GCGCGGCCTT GGAGAGCGTG
CGGTTGCTGG CGCAGACGTC CCAACGGATC GGCGAAGTCG TCGGCCTGAT CAACTCCATC
GCCAACCAGA CCAACCTGCT GGCGCTCAAC GCCACCATCG AGGCGGCCCG TGCGGGCGCC
GCGGGCCGGG GCTTCGCCGT GGTCGCGACG GAGGTGAAGG CGCTGGCCGG GCAGACCGCC
CGGGCCACGG GCGAGATCGC GCAGCATGTC GGGCAGATCC AATCCGCGAC CGCGCGATCG
GTCGCGGCGA TCGAGCGGAT CGCCGGCATG ATCCATGGCC TGGACGAGAG CGCCACCACG
ATCGCCGCGG CGGTCGAGGA GCAGGCGGCG ACAGCAAACG AGATCAGCCG GAGCGCCCGC
GAGGCGGCGG TGCGCACCGA TGGTGTCGGA ACCAGTATCG CCGAGGTCGC CGGGACCGCG
GACACCTCTG CCGGCTCCGC CCGCTCGGTC CTGTCCGCGA CGACCACGTT CGATCAGCAG
ATGGAGCAGG TCACCAAGGC GGTTCAGGAC TTCCTGATCG AAGTCAGGCG GATCTGA
 
Protein sequence
MTFRRGAARS ADVSRHKPEA HDALSADFKA VFDALPVNVL VLHPIEATIT FANRRSVETL 
HTLRTYLPPS VNPDAMVGLS MDVFHKNPAH QRSIVADPSR LPWRTKIRLG PKTLDLHVSP
VRDDDGRYIA AVLTWSDMTP LTDSIASFDG LISAALREAA EATGLMRSAA ERVLSATDAT
SRSADSAASG AAETTTNVQS VAAAVEELTA SNGEITRQVN RTSTATGQAV TEAGAALESV
RLLAQTSQRI GEVVGLINSI ANQTNLLALN ATIEAARAGA AGRGFAVVAT EVKALAGQTA
RATGEIAQHV GQIQSATARS VAAIERIAGM IHGLDESATT IAAAVEEQAA TANEISRSAR
EAAVRTDGVG TSIAEVAGTA DTSAGSARSV LSATTTFDQQ MEQVTKAVQD FLIEVRRI