More than 300 homologs were found in PanDaTox collection
for query gene Rmar_2436 on replicon NC_013501
Organism: Rhodothermus marinus DSM 4252



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013501  Rmar_2436  response regulator receiver protein  100 
 
 		 124 aa  248  2e-65  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  39.66 
 
 		 236 aa  84  7e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_013216  Dtox_3754  two component transcriptional regulator, LuxR family  36.84 
 
 		 216 aa  81.6  0.000000000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00290124  normal  1 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  38.39 
 
 		 213 aa  81.6  0.000000000000004  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  39.62 
 
 		 242 aa  80.5  0.000000000000007  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  35.59 
 
 		 212 aa  80.1  0.000000000000008  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  38.79 
 
 		 219 aa  79.3  0.00000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  34.75 
 
 		 222 aa  79.7  0.00000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  36.84 
 
 		 231 aa  80.1  0.00000000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  38.83 
 
 		 241 aa  80.1  0.00000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_009972  Haur_0710  two component LuxR family transcriptional regulator  43.18 
 
 		 240 aa  80.1  0.00000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  35 
 
 		 213 aa  79  0.00000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  38.6 
 
 		 223 aa  78.6  0.00000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.172592 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  38.39 
 
 		 213 aa  77.8  0.00000000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  34.82 
 
 		 223 aa  77.8  0.00000000000005  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  36.84 
 
 		 217 aa  77.4  0.00000000000007  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal  1 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  37.93 
 
 		 219 aa  77.4  0.00000000000007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_011666  Msil_2271  two component transcriptional regulator, LuxR family  32.76 
 
 		 223 aa  76.3  0.0000000000001  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007498  Pcar_1400  two component signal transduction response regulator  31.62 
 
 		 214 aa  76.3  0.0000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A2794  nitrate/nitrite response regulator protein NarP  35.51 
 
 		 209 aa  76.6  0.0000000000001  Yersinia pestis Angola  Bacteria  normal  1  normal  0.0858473 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  39.47 
 
 		 216 aa  76.6  0.0000000000001  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_010465  YPK_1384  two component LuxR family transcriptional regulator  35.51 
 
 		 209 aa  76.6  0.0000000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  38.24 
 
 		 219 aa  76.6  0.0000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_1270  nitrate/nitrite response regulator protein NarP  35.51 
 
 		 209 aa  76.6  0.0000000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.214676  n/a   
 
 
-
 
NC_010725  Mpop_3828  two component transcriptional regulator, LuxR family  33.33 
 
 		 220 aa  75.5  0.0000000000002  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_2900  transcriptional regulator NarL  33.04 
 
 		 216 aa  75.5  0.0000000000002  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  39.62 
 
 		 236 aa  75.9  0.0000000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_010717  PXO_00996  response regulator  35.64 
 
 		 210 aa  75.9  0.0000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  37.38 
 
 		 237 aa  75.5  0.0000000000002  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  38.1 
 
 		 207 aa  75.5  0.0000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_06170  response regulator  35.64 
 
 		 210 aa  75.9  0.0000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.624626  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  33.91 
 
 		 226 aa  75.5  0.0000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  35.59 
 
 		 206 aa  75.1  0.0000000000003  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  34.21 
 
 		 215 aa  75.1  0.0000000000003  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  34.21 
 
 		 215 aa  75.1  0.0000000000003  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  38.84 
 
 		 227 aa  75.5  0.0000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  34.21 
 
 		 215 aa  75.1  0.0000000000003  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  35.96 
 
 		 209 aa  75.1  0.0000000000003  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  32.2 
 
 		 216 aa  74.7  0.0000000000004  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_0320  two component LuxR family transcriptional regulator  31.58 
 
 		 221 aa  74.7  0.0000000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.15389  normal  1 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  32.14 
 
 		 217 aa  74.3  0.0000000000005  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  39.62 
 
 		 234 aa  73.9  0.0000000000007  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  35.96 
 
 		 207 aa  73.9  0.0000000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  33.91 
 
 		 206 aa  73.9  0.0000000000007  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_014165  Tbis_1720  LuxR family two component transcriptional regulator  35.96 
 
 		 201 aa  73.6  0.0000000000008  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010644  Emin_1197  two component LuxR family transcriptional regulator  36.36 
 
 		 225 aa  73.6  0.0000000000008  Elusimicrobium minutum Pei191  Bacteria  normal  1  normal  0.0485473 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  39.47 
 
 		 215 aa  73.6  0.0000000000008  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  33.33 
 
 		 215 aa  73.6  0.0000000000009  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_007912  Sde_2054  response regulator receiver domain-containing protein  33.93 
 
 		 198 aa  73.6  0.0000000000009  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  0.595634 
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  32.76 
 
 		 223 aa  73.2  0.000000000001  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal  1 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  33.9 
 
 		 228 aa  72.8  0.000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  36.61 
 
 		 250 aa  73.2  0.000000000001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  37.39 
 
 		 241 aa  73.2  0.000000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_1869  two component LuxR family transcriptional regulator  39.53 
 
 		 231 aa  73.2  0.000000000001  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  35.65 
 
 		 213 aa  72.8  0.000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.624898 
 
 
-
 
NC_009972  Haur_1563  two component LuxR family transcriptional regulator  33.88 
 
 		 257 aa  72.8  0.000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.781509  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  37.38 
 
 		 225 aa  73.2  0.000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  38.05 
 
 		 230 aa  73.2  0.000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  36.13 
 
 		 215 aa  72.8  0.000000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_011666  Msil_3829  two component transcriptional regulator, LuxR family  32.2 
 
 		 211 aa  72.4  0.000000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.026767 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  38.79 
 
 		 217 aa  72  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  33.05 
 
 		 216 aa  72.8  0.000000000002  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  32.2 
 
 		 264 aa  72.4  0.000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_3748  two component LuxR family transcriptional regulator  30.77 
 
 		 211 aa  72.4  0.000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.107866  normal  1 
 
 
-
 
NC_010623  Bphy_4331  two component LuxR family transcriptional regulator  30.77 
 
 		 212 aa  72  0.000000000002  Burkholderia phymatum STM815  Bacteria  normal  0.748519  normal  1 
 
 
-
 
NC_010625  Bphy_6192  two component LuxR family transcriptional regulator  37.86 
 
 		 231 aa  72.4  0.000000000002  Burkholderia phymatum STM815  Bacteria  normal  0.446565  normal  0.0472092 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  33.33 
 
 		 253 aa  72.8  0.000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  31.15 
 
 		 217 aa  72.4  0.000000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  31.58 
 
 		 220 aa  72  0.000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  33.62 
 
 		 232 aa  71.6  0.000000000003  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  29.66 
 
 		 222 aa  71.6  0.000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  36.36 
 
 		 238 aa  71.6  0.000000000003  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  33.9 
 
 		 208 aa  71.6  0.000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  33.88 
 
 		 210 aa  71.6  0.000000000003  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_4561  two component transcriptional regulator, LuxR family  29.91 
 
 		 217 aa  71.6  0.000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  33.64 
 
 		 218 aa  71.6  0.000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  34.48 
 
 		 232 aa  71.6  0.000000000003  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  34.48 
 
 		 232 aa  71.2  0.000000000004  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  33.33 
 
 		 241 aa  71.2  0.000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_010501  PputW619_2781  two component LuxR family transcriptional regulator  36.04 
 
 		 204 aa  71.2  0.000000000004  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_3789  response regulator receiver  35.71 
 
 		 228 aa  71.2  0.000000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0916709 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  37.72 
 
 		 215 aa  71.2  0.000000000004  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  37.86 
 
 		 212 aa  71.2  0.000000000004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_009975  MmarC6_1722  response regulator receiver protein  33.64 
 
 		 123 aa  70.9  0.000000000005  Methanococcus maripaludis C6  Archaea  normal  0.298096  n/a   
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  33.86 
 
 		 225 aa  70.9  0.000000000005  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  38.14 
 
 		 227 aa  70.9  0.000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014151  Cfla_3337  two component transcriptional regulator, LuxR family  37.17 
 
 		 254 aa  71.2  0.000000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0952095  normal  0.130531 
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  35 
 
 		 242 aa  71.2  0.000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_4860  two component transcriptional regulator, LuxR family  34.21 
 
 		 236 aa  70.9  0.000000000006  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.142587 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  34.15 
 
 		 228 aa  70.9  0.000000000006  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  31.03 
 
 		 212 aa  70.9  0.000000000006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010676  Bphyt_6883  two component transcriptional regulator, LuxR family  34.78 
 
 		 213 aa  70.9  0.000000000006  Burkholderia phytofirmans PsJN  Bacteria  normal  0.239531  normal  0.170628 
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  32.76 
 
 		 209 aa  70.5  0.000000000007  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  36.28 
 
 		 226 aa  70.5  0.000000000007  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  36.89 
 
 		 220 aa  70.5  0.000000000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  32.46 
 
 		 215 aa  70.5  0.000000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_4976  two component transcriptional regulator, LuxR family  34.21 
 
 		 218 aa  70.5  0.000000000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.289575  normal  0.034027 
 
 
-
 
NC_009997  Sbal195_3836  two component LuxR family transcriptional regulator  32.8 
 
 		 209 aa  70.5  0.000000000007  Shewanella baltica OS195  Bacteria  hitchhiker  0.00000136397  normal  0.0231387 
 
 
-
 
NC_010571  Oter_1239  two component LuxR family transcriptional regulator  32.76 
 
 		 196 aa  70.5  0.000000000007  Opitutus terrae PB90-1  Bacteria  normal  0.0482404  normal  0.916816 
 
 
-
 
NC_009665  Shew185_3713  two component LuxR family transcriptional regulator  32.8 
 
 		 209 aa  70.5  0.000000000007  Shewanella baltica OS185  Bacteria  hitchhiker  0.000000000161759  n/a   
 
 
-
 
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