More than 300 homologs were found in PanDaTox collection
for query gene Meso_2798 on replicon NC_008254
Organism: Chelativorans sp. BNC1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008254  Meso_2798  short-chain dehydrogenase/reductase SDR  100 
 
 
277 aa  553  1e-156  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2863  short-chain dehydrogenase/reductase SDR  46.46 
 
 
248 aa  208  8e-53  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_02320  Short-chain dehydrogenase/reductase SDR  44.14 
 
 
254 aa  203  3e-51  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.278607  n/a   
 
 
-
 
NC_010552  BamMC406_3220  short-chain dehydrogenase/reductase SDR  45.17 
 
 
252 aa  189  4e-47  Burkholderia ambifaria MC40-6  Bacteria  normal  0.466231  normal 
 
 
-
 
NC_008228  Patl_1914  short-chain dehydrogenase/reductase SDR  41.47 
 
 
255 aa  189  4e-47  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.142248  n/a   
 
 
-
 
NC_010515  Bcenmc03_4336  short-chain dehydrogenase/reductase SDR  45.56 
 
 
252 aa  187  1e-46  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.352293  normal  0.915226 
 
 
-
 
NC_008345  Sfri_2067  short-chain dehydrogenase/reductase SDR  40.08 
 
 
253 aa  186  5e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B3036  Short-chain dehydrogenase/reductase SDR  45.17 
 
 
252 aa  185  7e-46  Burkholderia sp. 383  Bacteria  normal  0.0329583  normal 
 
 
-
 
NC_010086  Bmul_5272  short-chain dehydrogenase/reductase SDR  44.4 
 
 
252 aa  184  2.0000000000000003e-45  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.475195  normal 
 
 
-
 
NC_008061  Bcen_5017  short-chain dehydrogenase/reductase SDR  44.79 
 
 
252 aa  184  2.0000000000000003e-45  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.656506  n/a   
 
 
-
 
NC_008543  Bcen2424_5843  short-chain dehydrogenase/reductase SDR  44.79 
 
 
252 aa  184  2.0000000000000003e-45  Burkholderia cenocepacia HI2424  Bacteria  normal  0.163211  normal 
 
 
-
 
NC_008391  Bamb_5080  short-chain dehydrogenase/reductase SDR  44.79 
 
 
252 aa  183  3e-45  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_1005  short-chain dehydrogenase/reductase SDR  37.55 
 
 
260 aa  167  2e-40  Psychrobacter sp. PRwf-1  Bacteria  normal  hitchhiker  0.0000302146 
 
 
-
 
NC_009439  Pmen_2680  short chain dehydrogenase  40.47 
 
 
253 aa  166  2.9999999999999998e-40  Pseudomonas mendocina ymp  Bacteria  normal  0.313407  normal  0.819387 
 
 
-
 
NC_009972  Haur_1658  short-chain dehydrogenase/reductase SDR  38.43 
 
 
247 aa  160  2e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0373  short chain dehydrogenase/reductase family oxidoreductase  36.59 
 
 
272 aa  159  3e-38  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_5557  short-chain dehydrogenase/reductase SDR  36.09 
 
 
272 aa  159  4e-38  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2751  short-chain dehydrogenase/reductase SDR  37.84 
 
 
252 aa  159  4e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal 
 
 
-
 
NC_013743  Htur_2798  short-chain dehydrogenase/reductase SDR  36.05 
 
 
256 aa  159  6e-38  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_2816  3-hydroxybutyrate dehydrogenase  39.38 
 
 
257 aa  158  7e-38  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002947  PP_1946  short chain dehydrogenase/reductase family oxidoreductase  37.26 
 
 
262 aa  158  8e-38  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.000000538802 
 
 
-
 
NC_007492  Pfl01_4194  short chain dehydrogenase  38.52 
 
 
253 aa  158  8e-38  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.896625 
 
 
-
 
NC_007969  Pcryo_0863  short-chain dehydrogenase/reductase SDR  37.5 
 
 
264 aa  157  2e-37  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4222  putative Levodione reductase  37.15 
 
 
257 aa  155  6e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_0075  short-chain dehydrogenase/reductase SDR  36.65 
 
 
250 aa  155  7e-37  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4406  short-chain dehydrogenase/reductase SDR  40.47 
 
 
253 aa  154  1e-36  Haliangium ochraceum DSM 14365  Bacteria  normal  0.410481  normal 
 
 
-
 
NC_008391  Bamb_3260  short-chain dehydrogenase/reductase SDR  38.91 
 
 
255 aa  154  2e-36  Burkholderia ambifaria AMMD  Bacteria  decreased coverage  0.00276657  normal  0.102342 
 
 
-
 
NC_008148  Rxyl_2275  short-chain dehydrogenase/reductase SDR  40.39 
 
 
254 aa  153  2.9999999999999998e-36  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0594  short-chain dehydrogenase/reductase SDR  36.19 
 
 
251 aa  153  2.9999999999999998e-36  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000426585  n/a   
 
 
-
 
NC_012912  Dd1591_2736  short-chain dehydrogenase/reductase SDR  38.91 
 
 
255 aa  153  2.9999999999999998e-36  Dickeya zeae Ech1591  Bacteria  normal  0.777047  n/a   
 
 
-
 
NC_010483  TRQ2_0608  short-chain dehydrogenase/reductase SDR  36.19 
 
 
251 aa  153  2.9999999999999998e-36  Thermotoga sp. RQ2  Bacteria  normal  0.236394  n/a   
 
 
-
 
NC_007948  Bpro_0516  short-chain dehydrogenase/reductase SDR  38.37 
 
 
249 aa  152  4e-36  Polaromonas sp. JS666  Bacteria  normal  0.875683  normal 
 
 
-
 
NC_010581  Bind_1760  short-chain dehydrogenase/reductase SDR  40.91 
 
 
255 aa  152  7e-36  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.233538  normal 
 
 
-
 
NC_008312  Tery_2914  short chain dehydrogenase  36.19 
 
 
255 aa  151  1e-35  Trichodesmium erythraeum IMS101  Bacteria  normal  0.892644  normal  0.135282 
 
 
-
 
NC_008726  Mvan_1861  short-chain dehydrogenase/reductase SDR  36.76 
 
 
268 aa  151  1e-35  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.651686  normal  0.848972 
 
 
-
 
NC_002947  PP_1817  short chain dehydrogenase  37.98 
 
 
253 aa  150  2e-35  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3894  short chain dehydrogenase  37.6 
 
 
253 aa  150  2e-35  Pseudomonas putida F1  Bacteria  normal  0.933722  normal  0.0806905 
 
 
-
 
NC_013730  Slin_3152  short-chain dehydrogenase/reductase SDR  36.86 
 
 
250 aa  150  2e-35  Spirosoma linguale DSM 74  Bacteria  normal  0.182399  normal 
 
 
-
 
NC_009656  PSPA7_3623  short chain dehydrogenase  38.91 
 
 
253 aa  150  3e-35  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0211534  n/a   
 
 
-
 
NC_010322  PputGB1_1396  short chain dehydrogenase  38.13 
 
 
253 aa  150  3e-35  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1081  oxidoreductase, putative short-chain alcohol dehydrogenase  39.52 
 
 
253 aa  149  5e-35  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0777  2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase  36.19 
 
 
256 aa  149  6e-35  Methanosarcina barkeri str. Fusaro  Archaea  normal  unclonable  0.000000000602932 
 
 
-
 
NC_011885  Cyan7425_0107  short-chain dehydrogenase/reductase SDR  33.59 
 
 
258 aa  148  1.0000000000000001e-34  Cyanothece sp. PCC 7425  Bacteria  n/a    normal 
 
 
-
 
NC_007348  Reut_B5463  Short-chain dehydrogenase/reductase SDR  37.84 
 
 
251 aa  148  1.0000000000000001e-34  Ralstonia eutropha JMP134  Bacteria  normal  0.230582  n/a   
 
 
-
 
NC_007958  RPD_0355  short-chain dehydrogenase/reductase SDR  37.94 
 
 
263 aa  147  1.0000000000000001e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  decreased coverage  0.00000760103 
 
 
-
 
NC_011892  Mnod_8330  short-chain dehydrogenase/reductase SDR  38.17 
 
 
255 aa  147  1.0000000000000001e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1137  short-chain dehydrogenase/reductase SDR  38.76 
 
 
255 aa  147  1.0000000000000001e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.420878 
 
 
-
 
NC_010501  PputW619_1425  short chain dehydrogenase  37.35 
 
 
253 aa  147  2.0000000000000003e-34  Pseudomonas putida W619  Bacteria  normal  0.857979  normal  0.357324 
 
 
-
 
NC_011138  MADE_01006  short-chain alcohol dehydrogenase-like protein  38.82 
 
 
255 aa  147  2.0000000000000003e-34  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  37.31 
 
 
254 aa  146  4.0000000000000006e-34  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
NC_011831  Cagg_1619  short-chain dehydrogenase/reductase SDR  36.15 
 
 
253 aa  146  5e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.901509  normal  0.0346671 
 
 
-
 
NC_008228  Patl_2140  short-chain dehydrogenase/reductase SDR  37.5 
 
 
254 aa  145  6e-34  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1526  short-chain dehydrogenase/reductase SDR  37.31 
 
 
254 aa  145  6e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS3941  3-hydroxybutyrate dehydrogenase  36.82 
 
 
258 aa  144  1e-33  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1723  3-oxoacyl-(acyl-carrier-protein) reductase  33.99 
 
 
247 aa  144  1e-33  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000657249  n/a   
 
 
-
 
NC_007530  GBAA_4249  3-hydroxybutyrate dehydrogenase  36.82 
 
 
258 aa  144  1e-33  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013744  Htur_3801  short-chain dehydrogenase/reductase SDR  35.86 
 
 
251 aa  144  2e-33  Haloterrigena turkmenica DSM 5511  Archaea  hitchhiker  0.00700482  n/a   
 
 
-
 
NC_011658  BCAH187_A4157  3-hydroxybutyrate dehydrogenase  36.82 
 
 
258 aa  144  2e-33  Bacillus cereus AH187  Bacteria  normal  0.212799  n/a   
 
 
-
 
NC_011773  BCAH820_4051  3-hydroxybutyrate dehydrogenase  36.82 
 
 
258 aa  144  2e-33  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008463  PA14_43180  short chain dehydrogenase  39.3 
 
 
253 aa  144  2e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.350844 
 
 
-
 
NC_003909  BCE_4084  3-hydroxybutyrate dehydrogenase  36.43 
 
 
262 aa  143  3e-33  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0264  putative short-chain dehydrogenase  37.78 
 
 
262 aa  143  3e-33  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3801  short-chain dehydrogenase/reductase SDR  38.65 
 
 
277 aa  143  4e-33  Frankia sp. CcI3  Bacteria  normal  0.0429275  normal 
 
 
-
 
NC_009621  Smed_5225  short-chain dehydrogenase/reductase SDR  37.02 
 
 
257 aa  142  4e-33  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B1101  3-hydroxybutyrate dehydrogenase  37.21 
 
 
258 aa  143  4e-33  Bacillus cereus G9842  Bacteria  normal  normal  0.845922 
 
 
-
 
NC_011725  BCB4264_A4137  3-hydroxybutyrate dehydrogenase  37.21 
 
 
258 aa  142  8e-33  Bacillus cereus B4264  Bacteria  normal  0.531787  n/a   
 
 
-
 
NC_013730  Slin_2192  short-chain dehydrogenase/reductase SDR  33.21 
 
 
256 aa  142  8e-33  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.0046226 
 
 
-
 
NC_013132  Cpin_5999  short-chain dehydrogenase/reductase SDR  34.92 
 
 
263 aa  142  9e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_3773  3-hydroxybutyrate dehydrogenase  36.43 
 
 
258 aa  141  9.999999999999999e-33  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6656  short-chain dehydrogenase/reductase SDR  37.7 
 
 
249 aa  141  9.999999999999999e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  0.790867  normal  0.270985 
 
 
-
 
NC_011071  Smal_2771  short chain dehydrogenase  38.34 
 
 
253 aa  141  9.999999999999999e-33  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013744  Htur_3816  short-chain dehydrogenase/reductase SDR  37.74 
 
 
253 aa  141  9.999999999999999e-33  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.840312  n/a   
 
 
-
 
NC_007958  RPD_2421  short-chain dehydrogenase/reductase SDR  34.65 
 
 
259 aa  141  9.999999999999999e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0231267 
 
 
-
 
NC_007511  Bcep18194_B1406  Short-chain dehydrogenase/reductase SDR  37.4 
 
 
251 aa  140  1.9999999999999998e-32  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2723  short-chain dehydrogenase/reductase SDR  37.14 
 
 
251 aa  140  1.9999999999999998e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1552  short-chain dehydrogenase/reductase SDR  35.16 
 
 
248 aa  140  1.9999999999999998e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0714452  normal 
 
 
-
 
NC_013411  GYMC61_1972  3-ketoacyl-(acyl-carrier-protein) reductase  36.96 
 
 
247 aa  140  3e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008532  STER_0433  3-ketoacyl-(acyl-carrier-protein) reductase  35.86 
 
 
244 aa  140  3e-32  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00087459  n/a   
 
 
-
 
NC_009524  PsycPRwf_0909  short-chain dehydrogenase/reductase SDR  33.86 
 
 
244 aa  139  3.9999999999999997e-32  Psychrobacter sp. PRwf-1  Bacteria  normal  0.271894  normal 
 
 
-
 
NC_009708  YpsIP31758_2523  oxidoreductase, short chain dehydrogenase/reductase family protein  33.07 
 
 
248 aa  139  4.999999999999999e-32  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2964  oxidoreductase, short chain dehydrogenase/reductase family protein  33.07 
 
 
248 aa  139  4.999999999999999e-32  Yersinia pestis Angola  Bacteria  normal  0.95662  hitchhiker  0.0000180421 
 
 
-
 
NC_007347  Reut_A1600  NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR  38.55 
 
 
248 aa  139  4.999999999999999e-32  Ralstonia eutropha JMP134  Bacteria  normal  0.766796  n/a   
 
 
-
 
NC_010465  YPK_2613  short-chain dehydrogenase/reductase SDR  33.07 
 
 
248 aa  139  4.999999999999999e-32  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.219217  n/a   
 
 
-
 
NC_009338  Mflv_4508  short-chain dehydrogenase/reductase SDR  34.98 
 
 
273 aa  139  4.999999999999999e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.19021  normal 
 
 
-
 
NC_002976  SERP2379  short chain dehydrogenase/reductase family oxidoreductase  33.59 
 
 
257 aa  138  8.999999999999999e-32  Staphylococcus epidermidis RP62A  Bacteria  normal  0.303229  n/a   
 
 
-
 
NC_012880  Dd703_1599  short-chain dehydrogenase/reductase SDR  35.43 
 
 
252 aa  138  8.999999999999999e-32  Dickeya dadantii Ech703  Bacteria  normal  0.166139  n/a   
 
 
-
 
NC_009674  Bcer98_2729  3-hydroxybutyrate dehydrogenase  36.58 
 
 
258 aa  138  8.999999999999999e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.131703  n/a   
 
 
-
 
NC_011892  Mnod_8333  short-chain dehydrogenase/reductase SDR  34.24 
 
 
257 aa  138  1e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.319832  n/a   
 
 
-
 
NC_009457  VC0395_A1193  short chain dehydrogenase/reductase family oxidoreductase  37.6 
 
 
252 aa  138  1e-31  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_05081  3-oxoacyl-[acyl-carrier protein] reductase  33.46 
 
 
250 aa  138  1e-31  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.162194 
 
 
-
 
NC_007760  Adeh_2140  3-hydroxybutyrate dehydrogenase  38.17 
 
 
261 aa  137  1e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1817  3-hydroxybutyrate dehydrogenase  38.17 
 
 
261 aa  138  1e-31  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.181531  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3258  3-ketoacyl-(acyl-carrier-protein) reductase  33.73 
 
 
246 aa  138  1e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.266771  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3859  3-hydroxybutyrate dehydrogenase  37.07 
 
 
259 aa  137  2e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_1785  3-oxoacyl-[acyl-carrier-protein] reductase  33.08 
 
 
250 aa  137  2e-31  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5290  3-oxoacyl-(acyl-carrier-protein) reductase  37.6 
 
 
274 aa  137  2e-31  Cupriavidus metallidurans CH34  Bacteria  normal  0.0720968  normal  0.127644 
 
 
-
 
NC_014158  Tpau_1547  short-chain dehydrogenase/reductase SDR  37.64 
 
 
269 aa  137  2e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.255418  n/a   
 
 
-
 
NC_013158  Huta_2979  short-chain dehydrogenase/reductase SDR  34.51 
 
 
255 aa  137  3.0000000000000003e-31  Halorhabdus utahensis DSM 12940  Archaea  normal  0.259784  n/a   
 
 
-
 
NC_010725  Mpop_0321  short-chain dehydrogenase/reductase SDR  37.79 
 
 
254 aa  137  3.0000000000000003e-31  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9335  short-chain dehydrogenase/reductase SDR  35.52 
 
 
250 aa  136  3.0000000000000003e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.728753  normal  0.802866 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>