| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3220 |
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| Symbol | |
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| ID | 6180156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 123114 |
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| End bp | 123872 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682995 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001809909 |
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| Protein GI | 172062258 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.466231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG ACAGCTATGC GGGGCAGGCC GTGATGATCA CCGGCGCCGC GAGCGGCTTC
GGTGCGCTGC TCGCGAGCGA GCTGGCCGCG ATGGGCGCGC GGCTCGCGCT CGGCGACCTG
AACGACGACG CGCTCGAACG CGTTGCCGCG CCGCTGCGCG CGGCCGGTGC CGACGTGATC
GCGCAGCGCT GCGACGTGCG CGTCGAAGCT GACGTGGCCT CGCTGGTGCA GGCGGCCGCC
GCCCGCTTCG GGCGGCTCGA CGTCGGCATC AACAATGCGG GCATCGCGCC GCCGATGAAG
GCGCTGATCG ATACCGACGA AGCCGATCTC GACCTGAGCT TCGCGGTGAA TGCGAAGGGC
GTGTTCTTCG GGATGAAGCA CCAGATCCGC CAGATGCTCG CGCAGCGCGA AGGCGTGATC
CTGAACGTCG CGTCGATGGC CGGGCTCGGC GGTGCGCCGA AGCTGGCCGC GTACGCGGCG
TCGAAGCATG CGGTGGTCGG GCTCACGAAG ACGGCCGCGC TCGAATACGC ACGCCACGGC
ATCCGCGTGA ACGCGGTGTG CCCGTTCTAC AGCACGACGC CGATGGTCAC CGACAGCGAC
ATCGGCGACC GCCAGGACTT TCTCGCGCAG GGCTCGCCGA TGAAGCGGCT CGGCCGGCCC
GACGAAATCG TCGCGACGAT GCTGATGCTG TGCGCGAAGG AAAACACTTA TCTGACCGGG
CAGGCCGTCG CCGTCGACGG CGGTGTCTCG GCCTTCTGA
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| Protein sequence | MKLDSYAGQA VMITGAASGF GALLASELAA MGARLALGDL NDDALERVAA PLRAAGADVI
AQRCDVRVEA DVASLVQAAA ARFGRLDVGI NNAGIAPPMK ALIDTDEADL DLSFAVNAKG
VFFGMKHQIR QMLAQREGVI LNVASMAGLG GAPKLAAYAA SKHAVVGLTK TAALEYARHG
IRVNAVCPFY STTPMVTDSD IGDRQDFLAQ GSPMKRLGRP DEIVATMLML CAKENTYLTG
QAVAVDGGVS AF
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