Gene Sros_9335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_9335 
Symbol 
ID8672686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp10286032 
End bp10286784 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content72% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003344696 
Protein GI271970500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.728753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.802866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTC AGGACAAGGT AGTTCTGGTG ACCGGGGGCG GGTCGGGCAT CGGCCGGGCC 
GTCGCGCAGG GGTTTGCCCG CCGGGGCGCG CAGGTGGTGG TGGCCGCGCG GGGGCAGGAG
GCGCTCGACC AGACCGTGAA GCTGATCGAG GCCGAGGGCG GCCGGGCCGC CGCGCTGACC
GTGGACGTCT CCGACTCCGC CTCGGTCGCC GGCCTGGTGG GCCGGATCGT GGAGCGGTAC
GGCAGGCTGG ACATCGCGAT CAACAACGCC GGCGTGCTCG CCATGGGCCA GGTCGCCGAC
CAGCCCGAGG ACGACTTCGC CCAGGTGATC GACATCAACC TGAACGGGAT CTTCCTGTCG
ATGAAGCACC AGATCCCGGC GATGCTGGCC GCCGGCGGCG GGGTCATCGT CAACTTCAGC
TCGCAGATCG GGACGCACAA GCGCATCCCC GGATTCGGCG CCTACGCCGC GTCCAAGGCC
GGGGTGACGG CGCTGACGCG CACCGCGGCG CTGGAGTACA TCGGCCGGGG CATCCGGATC
AACGCGATCA GCCCCGGCCC GCACGACACC TCGATGTCCA TGCGCCCGGG CGAGACGGAG
GCCGACCGGG CGGCCCGCGT GAAGGGGCAG CTCCCGATCG GCCGGGTCGG CTCCCTCGAC
GAGATCACCG GCACCGTCCT CTGGCTCGCC TCCGAGGACG CCGGCTTCGT CGTCGGCAGC
GACATCGTGG TGGACGGCGG CTCCACGGCC TGA
 
Protein sequence
MKFQDKVVLV TGGGSGIGRA VAQGFARRGA QVVVAARGQE ALDQTVKLIE AEGGRAAALT 
VDVSDSASVA GLVGRIVERY GRLDIAINNA GVLAMGQVAD QPEDDFAQVI DINLNGIFLS
MKHQIPAMLA AGGGVIVNFS SQIGTHKRIP GFGAYAASKA GVTALTRTAA LEYIGRGIRI
NAISPGPHDT SMSMRPGETE ADRAARVKGQ LPIGRVGSLD EITGTVLWLA SEDAGFVVGS
DIVVDGGSTA