| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1005 |
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| Symbol | |
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| ID | 5205546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1196080 |
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| End bp | 1196862 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599226 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001279905 |
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| Protein GI | 148652812 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000302146 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAATTTG AACCCAACAA AACTGTCGCC AACGTCCTCA ACAAACGCAT TTTAATCACA
GGCGGCGCTT CCGGTATTGG CGCGGCCAGT GCAAAGCTAT TGGCCAGTCG CGGCGCTAAG
ATAATCATTG CTGATTTGGC TGAAGACTTA GGCCATGCTT TAGCACAGCA AGCTTGGGCG
TCAGATCACA CGATAAACTT TATGAAAGTA GATGTCACTC AAGCTGCTGA GGTTAACGCA
TTATTTGCTT ATGCCGTAGA GCAGCTGGGA GGCCTTGATG TGGTGATCAA TAATGCTGGG
GTCGATCATC CGCCAGCGCC GCTACACCAG TTAACGGAAG ATGACTTTGA TCGTTGTATG
ACGGTGAATG TCAAAGGGGT TTGGCACTGT ATGCGCGCGG CCATTGCTTG CTTGAGTCCT
CATGGCGGTG GTCACGTTAT TAATGTGGCC TCTATTGCTG GTCTACGCTC AGCCCCCATG
CTGTCAGCTT ATAGCGCCTC AAAGCATGCA GTGATTGGAC TGACTAAGTC TGCTGCTATT
GAGTATGCCC GTGCCAATAT AAGGTTTAAT GCCGTCTGCC CAAGCTTTAT TGATACCCCT
ATGGTGCGCA ACAGCATGCT TAATATGAAT GAAAAGCAGC AGCACGCTTT ACTCAACGCC
AGTCCGATGC GCCGACTGGG CAAAGTTGAA GAAGTTGCCA GTGCGATTGC TTGGTTGGCC
AGTGATGAAA GCAGCTTTAT GAATGGTCAC AGCTTAACTT TAGATGGGGG TATGTTGGCA
TAA
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| Protein sequence | MEFEPNKTVA NVLNKRILIT GGASGIGAAS AKLLASRGAK IIIADLAEDL GHALAQQAWA
SDHTINFMKV DVTQAAEVNA LFAYAVEQLG GLDVVINNAG VDHPPAPLHQ LTEDDFDRCM
TVNVKGVWHC MRAAIACLSP HGGGHVINVA SIAGLRSAPM LSAYSASKHA VIGLTKSAAI
EYARANIRFN AVCPSFIDTP MVRNSMLNMN EKQQHALLNA SPMRRLGKVE EVASAIAWLA
SDESSFMNGH SLTLDGGMLA
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