| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0608 |
|---|
| Symbol | |
|---|
| ID | 6092025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 613800 |
|---|
| End bp | 614555 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642487794 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001738644 |
|---|
| Protein GI | 170288406 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.236394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTCC AAGGAAAAGT GGTTTTGATA ACAGGAGCAG GTTCCGGCAT CGGAAAGAAG
GCAGCCATTA TGTTCGCAGA AAGAGGAGCG AAGGTAGCAA TTAACGATAT CTCTGAGGAA
AAAGGAAAAG AAACAGTGGA GCTGATAAAG GGTCGGGGAG GAGAAGCTGC GTTTATCTTC
GGAGATGTGG CGAAAGATGC AGAACAGATA GTGAAGAAAA CAGTGGAAAC GTTCGGAAGG
CTTGACATCC TGGTGAACAA CGCTGGTATT GTGCCTTATG GGAACATAGA AGAGACTTCG
GAGGAAGACT TTGACAAAAC GATAGCCGTG AACGTCAAAG GGCCTTTCCT TCTTTCAAAA
TATGCTGTCG AGCAGATGAA AAAACAGGGC GGAGGAGTCA TTGTGAACGT TTCCTCCGAA
GCAGGACTCA TAGGGATTCC AAGAAGGTGT GTCTACAGTG TTTCAAAAGC AGCACTCCTG
GGACTCACAC GATCTCTTGC CGTTGACTAC GTCGATTACG GAATCAGGGT CAACGCGGTG
TGTCCAGGCA CCACTCAGTC TGAGGGGCTC ATGGCGAGGG TGAAGGCTTC TCCGAATCCA
GAAGAACTCC TGAAAAAGAT GACCTCCAGG ATCCCCATGA AGAGACTGGG GAAAGAAGAG
GAAATTGCCT TCGCAATCCT CTTTGCGGCG TGTGACGAAG CCGGATTTAT GACGGGCAGT
ATCATAAACA TAGATGGAGG TTCTACCGCT GTGTAA
|
|---|
| Protein sequence | MNFQGKVVLI TGAGSGIGKK AAIMFAERGA KVAINDISEE KGKETVELIK GRGGEAAFIF
GDVAKDAEQI VKKTVETFGR LDILVNNAGI VPYGNIEETS EEDFDKTIAV NVKGPFLLSK
YAVEQMKKQG GGVIVNVSSE AGLIGIPRRC VYSVSKAALL GLTRSLAVDY VDYGIRVNAV
CPGTTQSEGL MARVKASPNP EELLKKMTSR IPMKRLGKEE EIAFAILFAA CDEAGFMTGS
IINIDGGSTA V
|
|---|
| |