Gene BBta_4222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4222 
Symbol 
ID5149044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4435539 
End bp4436312 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID640559047 
Productputative Levodione reductase 
Protein accessionYP_001240184 
Protein GI148255599 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT CGATTCGTCT CGACGGCAGG GTGGCCGTCG TCACCGGCGC GGCCGGACTC 
ATCGGCGCCG CGACCATGCG TCTGCTGGCC GCGCGCGGCG CCCGCATCGT CGCCATCGAC
CGGCGCGAAC AGGATCTGAA CGCGGCCATC GCGGCCCTGC CCGCCAGCGC CGAGCCCCTC
GCAATCGCCG CCGACGTGAC CGACGAGGCG CAGGTGGCGG CCTATGTGCA GCGGGCCTGT
GACCAGTTCG GAACCATTGA TGTGTTCTTC AACAATGCCG GCATCGAGGG CGAGATCAAG
TCGATCACCG ACTATCCGCT CGAGGCGTTC CGCCGCGTGC TCGACGTCAA TGTCGTCGGC
GTGTTCCTCG GCCTCAAGCA CGTTCTCCCG GTGATGCTGC AGCAGAACCG CGGTTCGATC
ATCAACACCG CCTCGATTGC CGGCCTGATC GGCTCGCCGC AGATTGCCGT CTACAGCGCC
AGCAAGCACG CCGTGATCGG CCTGACCAAG AGCGCGGCGT GGGAATGCAC CGGCACGAAT
GTGCGCGTGA ACTGCATCTG TCCCGGCCTG ATCGACAGCC GCATGCTGAG CGCGATCATC
GAAGGCCGCA GCGGCGCGCC CGTCCCGATC GACAGAATCG TCGATCGCGT CCCCGCGCGC
CGGCTCGGCC AGGGTTCGGA GGTCGCCGCC ATCGTCGCGT TCCTCGCCTC CGACGATGCG
AGCTACGTCT CCGGCGCCGC CTACACCGTC GATGGCGGCC GCACCGCGGC CTGA
 
Protein sequence
MTDSIRLDGR VAVVTGAAGL IGAATMRLLA ARGARIVAID RREQDLNAAI AALPASAEPL 
AIAADVTDEA QVAAYVQRAC DQFGTIDVFF NNAGIEGEIK SITDYPLEAF RRVLDVNVVG
VFLGLKHVLP VMLQQNRGSI INTASIAGLI GSPQIAVYSA SKHAVIGLTK SAAWECTGTN
VRVNCICPGL IDSRMLSAII EGRSGAPVPI DRIVDRVPAR RLGQGSEVAA IVAFLASDDA
SYVSGAAYTV DGGRTAA