Gene Pcryo_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0863 
Symbol 
ID4035299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1021241 
End bp1022035 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content50% 
IMG OID637973326 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_580128 
Protein GI93005691 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGA ATACAAATGG AATTGCATCA GACGTAGCCA GTAACGTTTC TGGTAAACGT 
ATTTTAATCA CGGGCGGTGC GTCTGGCATC GGTGCGGCAA GTGCGTTATT GTTAGCCAGT
CGCGGCGCAA AAGTCGTGAT CGGTGATATG GCAGAAGAGA TGGGCGCAGC CGTTGCCAAG
CAAGGTCAAG ATGCGGGCAA TAGTATCGTC TTTAAAAAGG TCGATGTGAC GATTGGCGAC
GAAGTACGTG CATTATTTGC CTTTGCCATA GAAACGCTGG GTGGTCTTGA TGTCGTGGTA
AATAATGCGG GCATCGACCA TCAGCCTGCA CCGATGCATG AGCTAAGTGA TGATGATTTT
GACCGTAATA TTGCCGTTAA TCTAAAAGGT GTCTGGCATT GCATGCGTGC GGCTGTTACT
TGTATGGCAG CCAATGGTGG CGGTCACGTG ATTAATGTCG CCTCTATCGC AGGGCTGCGT
TCTGCGCCGT TATTGTCAGC GTATAGCGCC GCTAAACATG GCGTGATGGG ACTGACGAAG
TCTGCTGCTC ATGAATATGC GCGCGTCAAT ATCCGCTTTA ATGCCGTTTG TCCAAGCTTT
ATTGATACCC CTATGGTGCA AAATACCATG GCGAAGATGG GCGAGCGAGC GCAAAAAGCA
ACAATTAATG CCAGCCCGCT ACGCCGTTTA GGGACAGTTG ATGAAGTATC CGGCGCGATT
GCATGGCTGG CGAGCGATGA AAGCAGCTTT ATGAATGGTC ATGCCTTTAC CCTTGATGGT
GGCATGTTGG CTTAG
 
Protein sequence
MTLNTNGIAS DVASNVSGKR ILITGGASGI GAASALLLAS RGAKVVIGDM AEEMGAAVAK 
QGQDAGNSIV FKKVDVTIGD EVRALFAFAI ETLGGLDVVV NNAGIDHQPA PMHELSDDDF
DRNIAVNLKG VWHCMRAAVT CMAANGGGHV INVASIAGLR SAPLLSAYSA AKHGVMGLTK
SAAHEYARVN IRFNAVCPSF IDTPMVQNTM AKMGERAQKA TINASPLRRL GTVDEVSGAI
AWLASDESSF MNGHAFTLDG GMLA