Gene NATL1_05081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05081 
Symbol 
ID4780912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp463082 
End bp463834 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content39% 
IMG OID640083783 
Product3-oxoacyl-[acyl-carrier protein] reductase 
Protein accessionYP_001014335 
Protein GI124025219 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.162194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTAT CAAAATTACT TGAAGGACAG ACTGCAATTG TAACTGGCGC AAGCAGAGGT 
ATTGGTAAAG CTATTGCAAT TTTTCTAGCG AAGGAAGGAG CAGAAGTAAT CATCAATTAT
TCTTCATCTT TGGAAAATGC AAATAAAGTC GTATCAGAAA TAAACTCCTT TGGAGGGAAG
GCATACCCTC TTCAAGCTGA TATTTCTAAT GAAAACTCGG TAAATGACTT AATAAAAACA
GTATTGGAGA AAAATAATAA AATTGATGTT CTCGTCAATA ACGCTGGGAT AACTAAAGAT
GGCCTTTTAA TGAGAATGAA AACGGACGAT TGGCAGAAAG TTTTAGATCT TAACTTGAGT
GGTGTTTTTT ATTGCACAAG AGCGGTATCT AGGCAGATGT TGAAGCAAAA AAAAGGAAGA
ATTATCAACA TAACTTCTGT AGTTGGGTTG ATGGGCAACC CAGGGCAAGC AAATTATTCT
GCGGCCAAGG CAGGAGTAGT AGGTCTCACA CAAAGCGCTG CAAAAGAATT TGCCAGCAGA
GGAATTACTG TAAATGCAGT TGCTCCTGGT TTTATTTCAA CTGATATGAC CAAAGATCTG
GATAGTGAAT CAATCCTTTC TGCTATCCCG CTTGGACGAT TCGGCAACCC TGAAGATGTT
GCAGGGGCAG TGAGGTTTTT AGCAGCGGAT CCTTCGGCGT CTTACATAAC AGGTCAGGTA
ATTCAAGTTG ATGGTGGGAT GGTTATGAGT TAA
 
Protein sequence
MTLSKLLEGQ TAIVTGASRG IGKAIAIFLA KEGAEVIINY SSSLENANKV VSEINSFGGK 
AYPLQADISN ENSVNDLIKT VLEKNNKIDV LVNNAGITKD GLLMRMKTDD WQKVLDLNLS
GVFYCTRAVS RQMLKQKKGR IINITSVVGL MGNPGQANYS AAKAGVVGLT QSAAKEFASR
GITVNAVAPG FISTDMTKDL DSESILSAIP LGRFGNPEDV AGAVRFLAAD PSASYITGQV
IQVDGGMVMS