Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5557 |
Symbol | |
ID | 8729331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6766745 |
End bp | 6767563 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003390322 |
Protein GI | 284040392 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAAGCT TTTTACATCA GGTTGCCTTC GTTACGGGCG CTGGGTCCGG TATTGGCCGG GCCACCGCAT TAGCTTTTGC CGGAGCAGGC GCTCGGGTTG TTGTCGCCGA AATCAATGAA GAAAGTGGCC GGGAAACCGT CGGTCACATT CACCAGTCAG GAGGAGACGC GCTGTTTGTG GCCTGTGACG TAGCTGAGCC AGCCCAAATC AATGCCGCCA TTCAGCAAAC CGTCGATACC TATGGGCGGT TAGACATTGC CATTAATAAC GCGGGTATTG GCGGTCGGTA TGGTCGGTTT ACGGAACAGA CGCCGGAAGA CTTCGACCGA ATTATGGCCG TTAATGTGGG TGGGGTTTTC TATTGTATGC AAGCGCAAAT CCGGCAAATG CTTCTACAGC AGAAAGGGAC TAAAGCAGAA GGAAAGACCG CCGAGTCGAA TCCCATGGAG AGCTTCCCGG TAGGGGGGCG CATTGTAAAC GTGGCCAGTA TTGCCGGGGT ACGGGGGATG CCGATGGGCG CACCTTACAG CGCGTCCAAA CATGCAGTGA TCGGCCTTAC AAAAACGGCT GCGCTGGAGT ATGTAAAACA GAATATCCGG ATTAATGCCG TTTGCCCGGC TTATACGAAT TCGGCGATGG TCGATGGGTT GATCAGTGCA GCACCCGCAA TGGAAGACCG CATGCGTCGT ATGATTCCCC TTGGCCGGTT TGGCCAGCCC GAAGAAATTG CCCAGGCCAT TTTGTGGCTT TGCGCCGACG ACAACACGTT TTTTACGGGA CAGACGCTCC AGCTGGATGG TGGTCTGACA GCCGGTTGA
|
Protein sequence | MISFLHQVAF VTGAGSGIGR ATALAFAGAG ARVVVAEINE ESGRETVGHI HQSGGDALFV ACDVAEPAQI NAAIQQTVDT YGRLDIAINN AGIGGRYGRF TEQTPEDFDR IMAVNVGGVF YCMQAQIRQM LLQQKGTKAE GKTAESNPME SFPVGGRIVN VASIAGVRGM PMGAPYSASK HAVIGLTKTA ALEYVKQNIR INAVCPAYTN SAMVDGLISA APAMEDRMRR MIPLGRFGQP EEIAQAILWL CADDNTFFTG QTLQLDGGLT AG
|
| |