| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5080 |
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| Symbol | |
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| ID | 4313971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2103058 |
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| End bp | 2103816 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638152923 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_776963 |
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| Protein GI | 115359825 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG ACAGCTATGC GGGGCAGGCC GTGATGATCA CCGGCGCTGC GAGCGGCTTC
GGCGCGTTGC TCGCGAGCGA GCTGGCCGCG ATGGGCGCGC GGCTCGCGCT CGGCGACCTG
AACGCCGACG CGCTCGAACG CGTGGCCGCG CCGCTGCGCG CGGCCGGCGC CGACGTGATC
GCGCAGCACT GCGACGTGCG CGTCGAAGCT GACGTGGCAT TGCTGGTGCA GTCGGCCGCC
GCGCGCTTCG GGCGGCTCGA CGTCGGCATC AACAACGCGG GCATCGCACC GCCGATGAAG
GCGCTGACCG ACACCGACGA AGCCGATCTC GACCTGAGCT TCGCGGTGAA CGCGAAGGGC
GTGTTCTTCG GGATGAAGCA CCAGATCCGC CAGATGCTCG CGCAGCGCGA AGGCGTGATC
CTGAACGTCG CGTCGATGGC CGGGCTCGGC GGCGCGCCGA AGCTGGCCGC GTACGCGGCG
TCGAAGCACG CGGTGATCGG GCTCACGAAG ACGGCCGCGC TCGAATACGC GCGCCACGGC
ATCCGCGTGA ACGCGGTGTG CCCGTTCTAC AGCACGACGC CGATGGTCAC CGACAGCGAC
ATCGGCGACC GCCAGGACTT TCTCGCGCAG GGCTCGCCGA TGAAGCGGCC CGGCCGGCCC
GACGAAATCG TCGCGACGAT GCTGATGCTG TGCGCGAAGG AAAACACTTA TCTGACCGGG
CAGGCCGTCG CCGTCGACGG CGGTGTCTCG GCCTTCTGA
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| Protein sequence | MKLDSYAGQA VMITGAASGF GALLASELAA MGARLALGDL NADALERVAA PLRAAGADVI
AQHCDVRVEA DVALLVQSAA ARFGRLDVGI NNAGIAPPMK ALTDTDEADL DLSFAVNAKG
VFFGMKHQIR QMLAQREGVI LNVASMAGLG GAPKLAAYAA SKHAVIGLTK TAALEYARHG
IRVNAVCPFY STTPMVTDSD IGDRQDFLAQ GSPMKRPGRP DEIVATMLML CAKENTYLTG
QAVAVDGGVS AF
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