| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2979 |
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| Symbol | |
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| ID | 8385288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 3067690 |
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| End bp | 3068457 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644974057 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003131873 |
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| Protein GI | 257054040 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.259784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGT ATGACTTCGA AGGCCGCGTC GCGGCCATCA CCGGTGCCGC ATCTGGAATC
GGCCGAGAGA CAGCGATTCA GTTCGCCGAG AACGGCGCCG CGGTCGTGGT TGCGGACGTC
GACGACGCCG GTGAGGATGT CGTCGCCGAG ATCGAGGAGG CTGGCGGTGA CGCCGTCTTT
GTGCATACGG ACGTAACAAG TATGGACGAC GTCGAGACGA TGGTCGAGAC GGCCGTCGAG
GAGTTCGGTC AACTCGATTA CGCGGTCAAC AGCGCGGGCG TCGGTGGCGA CCAGGTCCCG
ACTGGCGACG TCGAGGAGGA CGGATTCGAG CGCACCATCG ACATCAACCT GAACGGTGTC
TGGCGCTCGA TGAAGGCCGA ACTCGGTGCG ATGACCGACC AGGACGACGG CGGTGTCATC
ATCAACATGG CCTCGGTCCT CGGGAAAGTT GGCTTCGAGA ACTCTGCAGC GTACGTCTCC
TCGAAACACG GTGTACTCGG ACTGACGAAA ACGTCCGCCT GGGAATACGC CGAGGAAGGG
GTCCGGGTCA ACGCGGTCTG TCCCGGGTTC ATCGAGACCC AGATGCTGGA CGACGCCGGG
ATCACGACCA ACGAGGACGT TCGCGACTGG ATCGCCGGGA TGCACTCCGA AGGTCGCCTC
GGCCAGCCCG AGGAGATCGC CGACGCCGTC CTGTGGCTGT GTTCGGACGG TGCCTCCTTC
ACCAACGGCG AGGCACTCAC CGTCGACAGC GGCTTCACGG TAAAGTAA
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| Protein sequence | MTQYDFEGRV AAITGAASGI GRETAIQFAE NGAAVVVADV DDAGEDVVAE IEEAGGDAVF
VHTDVTSMDD VETMVETAVE EFGQLDYAVN SAGVGGDQVP TGDVEEDGFE RTIDINLNGV
WRSMKAELGA MTDQDDGGVI INMASVLGKV GFENSAAYVS SKHGVLGLTK TSAWEYAEEG
VRVNAVCPGF IETQMLDDAG ITTNEDVRDW IAGMHSEGRL GQPEEIADAV LWLCSDGASF
TNGEALTVDS GFTVK
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