| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1406 |
|---|
| Symbol | |
|---|
| ID | 3753171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 1597342 |
|---|
| End bp | 1598097 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637766255 |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_372164 |
|---|
| Protein GI | 78062256 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCT TCGCTGGAAA AGTTGCCGTC GTGACCGGCG CGGCGACCGG CATCGGACGA
CAGGCCGCAC TGTGCTTCGC CGAAGCCGGC GCGCAGGTCG CGCTGCTGGA CACCGTCGTG
TCCGCTGCCG AAGACGTCGC GCACGCGATC GAGCGCACCG GCGCCAGGGC GATCGTGCTG
CGCACCGACG TCTCGCGCGC CGACGACGTG CGCGATGCGA TCGACACGAC AGTCGCCACG
TTCGGGCGTC TCGACATCGC CTTCAACAAC GCCGGCATCG CGCCGCGCGG CGCGCCCGTC
GCCGAATTCG ACGAGGACGA ATGGGATCGC ACGATCGCCG TGAACCTGAA AGGCGTGTGG
CTGTGCATGA AACACGAATG CCGGCACATG CTGTCATTCG GCGGCGGGGC GATCGTCAAC
ACGTCGTCGA TCATGGGGAT TGTCAGCGGG CCGGGGCTCT CCGCGTATTC GGCATCGAAG
AGCGGCGTCA TCGGCCTCAC GAAATCGGTG GCGATCGACT ATGCGAGCCG CGGCATCCGC
GTGAATGCCG TGTGCCCCGG CGGCATTGCC CATACGGCGA TCACCGACCG CCCGGAAAAC
CGCGACGACA TGGCCCGACT GACGCAGGCC ACGCCGATGG CGCGGCTCGG CGAGCCGCGC
GACATCGCGG AAACGGTGAT ATGGCTGTGC TCGCCCGCCG CGCGCTTCGT CACCGGTCAG
GCAATCGCCG TCGACGGCGG TTTTACCGTG TGGTGA
|
|---|
| Protein sequence | MESFAGKVAV VTGAATGIGR QAALCFAEAG AQVALLDTVV SAAEDVAHAI ERTGARAIVL
RTDVSRADDV RDAIDTTVAT FGRLDIAFNN AGIAPRGAPV AEFDEDEWDR TIAVNLKGVW
LCMKHECRHM LSFGGGAIVN TSSIMGIVSG PGLSAYSASK SGVIGLTKSV AIDYASRGIR
VNAVCPGGIA HTAITDRPEN RDDMARLTQA TPMARLGEPR DIAETVIWLC SPAARFVTGQ
AIAVDGGFTV W
|
|---|
| |