| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1658 |
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| Symbol | |
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| ID | 5733542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1925948 |
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| End bp | 1926691 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641278797 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001544429 |
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| Protein GI | 159898182 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAACG GGAAAGTCGC AATTGTGACA GGCGGAGCGA TTGGAATTGG GGCGGCGACG
GCGCAACTCT TAGCCAAACA AGGCGCAATA GTGGTTATCG GCGATATTAA TGAGCAAACT
GGCTTAGCAA CGGTTGAGCA GATTCGCGGC AACGCAGGCC AAGCCTATTT TCGCCATTGC
GATGTTAGCC ACGAAGCCGA TATCCAAGCC TTAGTGCAGT TCGCTCTCGA CCAGGGCGGC
TTGGATATTA TGATTAATAA TGCTGGAATT GGCGGCAAGC CTGCACCTTT GCACTTAACC
GAGAATCACA ATTGGCAACG GGTGTTAGAC ATCGACTTAA CTGGCGTATT TTGGGGTCAA
AAATATGCTA GCCAAGCCAT GCTGGCAGGT GGCAAAGGCG GCGCGATTGT CAATGTTGCC
TCGATTGCGG GAGTGGCTGG CTCTCCCAAC CTTGGGCCAT ATGGCGTGGC CAAAGCTGGA
GTCATTCAAA TGAGCAAAAC TGGCGCAATT GAACTGGCCT CTGCTGGCAT TCGGATCAAT
GCAGTTTGCC CAGGCTGGAC GGAAACCGCT ATTTTAGATA CATTCGAGCC AAGCGTTCAA
GAACGGCTGA TTCGCTCGAT TCCGCTCAAG CGTATGGGCA CGCCCCACGA AATCGCCGAA
TTAATCGTCT TTTTGGCCTC GCCAGCAGCT AGTTTTATCA CTGGAGCTGA GTATATTATT
GATGGTGGGA TTACCAGCAT GTAG
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| Protein sequence | MLNGKVAIVT GGAIGIGAAT AQLLAKQGAI VVIGDINEQT GLATVEQIRG NAGQAYFRHC
DVSHEADIQA LVQFALDQGG LDIMINNAGI GGKPAPLHLT ENHNWQRVLD IDLTGVFWGQ
KYASQAMLAG GKGGAIVNVA SIAGVAGSPN LGPYGVAKAG VIQMSKTGAI ELASAGIRIN
AVCPGWTETA ILDTFEPSVQ ERLIRSIPLK RMGTPHEIAE LIVFLASPAA SFITGAEYII
DGGITSM
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