Gene PMN2A_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1785 
Symbol 
ID3607195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp450705 
End bp451457 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content39% 
IMG OID637688676 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_292976 
Protein GI72383621 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAT CAAAATTACT TGAAGGACAG ACTGCAATTG TAACTGGCGC AAGCAGAGGT 
ATTGGTAAAG CTATTGCAAT TTTTCTAGCG AAGGAAGGAG CAGAAGTAAT CATCAATTAT
TCTTCATCTT TGGAGAATGC AAATAAAGTC GTATCAGAAA TAAACTCCTT TGGAGGCAAA
GCATACCCTC TTCAAGCTGA TATTTCTAAT GAAAACTCGG TAAATGAATT AATAAAAACA
GTACTGGAGA AAAATAATAA AATTGATGTC CTCGTCAATA ACGCTGGTAT AACTAAAGAT
GGCCTTTTAA TGAGAATGAA AACGGACGAT TGGCAGAAAG TTTTAGATCT TAACTTGAGT
GGTGTTTTTT ATTGCACAAG AGCGGTATCA AGGCAGATGT TGAAGCAAAA AAAAGGAAGA
ATTATCAACA TAACTTCTGT CGTTGGGTTG ATGGGCAACC CAGGGCAAGC AAATTATTCT
GCAGCCAAGG CAGGAGTAGT AGGTCTCACA CAAAGTGCTG CAAAAGAATT TGCCAGCAGA
GGAATTACTG TAAATGCAGT TGCCCCTGGT TTTATTTCAA CTGATATGAC AAAAGATCTG
AATAGTGAAT CAATCCTTTC TGCTATCCCG CTTGGACGAT TCGGCAACCC TGAAGATGTT
GCAGGGGCAG TGAAGTTTTT AGCAGCGGAT CCTTCGGCTT CTTACATAAC AGGTCAGGTA
ATTCAAGTTG ATGGAGGGAT GGTTATGAGT TAA
 
Protein sequence
MTLSKLLEGQ TAIVTGASRG IGKAIAIFLA KEGAEVIINY SSSLENANKV VSEINSFGGK 
AYPLQADISN ENSVNELIKT VLEKNNKIDV LVNNAGITKD GLLMRMKTDD WQKVLDLNLS
GVFYCTRAVS RQMLKQKKGR IINITSVVGL MGNPGQANYS AAKAGVVGLT QSAAKEFASR
GITVNAVAPG FISTDMTKDL NSESILSAIP LGRFGNPEDV AGAVKFLAAD PSASYITGQV
IQVDGGMVMS