| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0516 |
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| Symbol | |
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| ID | 4011112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 521879 |
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| End bp | 522628 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637940201 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_547377 |
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| Protein GI | 91786425 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.875683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAC CCACAGTCCT AGTCACCGGC GCTCTGACCG GCATCGGCCG AGCCACAGCC
ATCGCCTTCG CCAAGCAAGG CGCCAATGTT GTCGTCAGCG GACGGCGTGA AGAGGCCGGT
CAGTCTCTAG CAGCCGAACT ACGAACGCTC GGCGCAAAGG CAGAATTCAT CAAGGCGGAT
GTCGCTAACG AAGCTGAAGT CAGAAGCCTT GTTGAAAAGG CTGTCAGCCT GTTTGGCCAG
CTTGACATTG CCATCAACAA TGCTGGCACC GAAGGCGCAT TGGGTCCGAT CACCGAGCAA
AGCACAGAAA ACGTTCACGC GACGTTTTCG ACCAACGTGC TGGGCACGCT GCTGTCGATG
AAGCATGAAA TTCGCGCCAT GCAGGCCCAG GGCCACGGCT CCATCGTCAA CCTCTCTTCC
ATCGCGGGGA AAGTTGGCAT GGCAGGCGCA TCGGTCTATG TCGCGAGCAA GCATGCGGTA
GAAGGTCTGA CCAAAAGCGC CGCTTTGGAG GGCGCAGCCT TCGGTGTTCG CGTCAACGCC
GTAGCGCCAG GGCCGGTCCA GACCGACATG CTCGACCGAT TTGTGGGTCG AGATGAAAGC
GTCAAAGCCG GATTCATGGC GGGGGTTCCG GCAAAGAGGG CCGCGACTGT GGATGAAATC
GCTGAAACGA TCATCTTCGT CGCTTCCTCC AAAGCCCCTT ACCTCACCGG CCAGTCCATC
GCTGTGGATG GCGGTTTCAC CATTCAATAA
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| Protein sequence | MNQPTVLVTG ALTGIGRATA IAFAKQGANV VVSGRREEAG QSLAAELRTL GAKAEFIKAD
VANEAEVRSL VEKAVSLFGQ LDIAINNAGT EGALGPITEQ STENVHATFS TNVLGTLLSM
KHEIRAMQAQ GHGSIVNLSS IAGKVGMAGA SVYVASKHAV EGLTKSAALE GAAFGVRVNA
VAPGPVQTDM LDRFVGRDES VKAGFMAGVP AKRAATVDEI AETIIFVASS KAPYLTGQSI
AVDGGFTIQ
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