More than 300 homologs were found in PanDaTox collection
for query gene Amir_5423 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_5423  binding-protein-dependent transport systems inner membrane component  100 
 
 
298 aa  567  1e-161  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_34310  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  59.51 
 
 
256 aa  280  2e-74  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1813  ABC transporter membrane protein  46.99 
 
 
256 aa  190  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.48548  normal  0.635137 
 
 
-
 
NC_013595  Sros_1819  ABC-type transporter, permease protein  46.06 
 
 
262 aa  166  5.9999999999999996e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.240116 
 
 
-
 
NC_013510  Tcur_4670  binding-protein-dependent transport systems inner membrane component  39.73 
 
 
259 aa  150  2e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3082  binding-protein-dependent transport systems inner membrane component  38.04 
 
 
280 aa  148  9e-35  Arthrobacter sp. FB24  Bacteria  normal  0.0593827  n/a   
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  34 
 
 
272 aa  134  1.9999999999999998e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
278 aa  133  5e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  35.93 
 
 
272 aa  129  6e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_014151  Cfla_0287  binding-protein-dependent transport systems inner membrane component  40.25 
 
 
286 aa  129  8.000000000000001e-29  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.122201  hitchhiker  0.000327752 
 
 
-
 
NC_011830  Dhaf_3643  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
252 aa  123  4e-27  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000799696  n/a   
 
 
-
 
NC_007333  Tfu_1692  putative ABC transporter membrane protein  36.6 
 
 
281 aa  122  7e-27  Thermobifida fusca YX  Bacteria  hitchhiker  0.00465779  n/a   
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
273 aa  122  8e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
273 aa  122  8e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2331  binding-protein-dependent transport systems inner membrane component  41.99 
 
 
261 aa  120  1.9999999999999998e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
273 aa  120  1.9999999999999998e-26  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_011832  Mpal_1145  binding-protein-dependent transport systems inner membrane component  34.71 
 
 
279 aa  121  1.9999999999999998e-26  Methanosphaerula palustris E1-9c  Archaea  normal  0.208956  normal 
 
 
-
 
NC_013159  Svir_18130  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  36.09 
 
 
283 aa  119  7e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  33.47 
 
 
261 aa  117  1.9999999999999998e-25  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_009712  Mboo_2012  binding-protein-dependent transport systems inner membrane component  29.36 
 
 
280 aa  117  3e-25  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.338733  normal  0.193625 
 
 
-
 
NC_014211  Ndas_4937  binding-protein-dependent transport systems inner membrane component  34.45 
 
 
287 aa  116  5e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0773955  normal 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  29.81 
 
 
273 aa  114  1.0000000000000001e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_008146  Mmcs_5349  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
271 aa  114  2.0000000000000002e-24  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5728  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
271 aa  114  2.0000000000000002e-24  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_5438  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
271 aa  114  2.0000000000000002e-24  Mycobacterium sp. KMS  Bacteria  normal  normal  0.586381 
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
255 aa  113  3e-24  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_009379  Pnuc_1186  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
257 aa  113  4.0000000000000004e-24  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.409709  n/a   
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  34.76 
 
 
285 aa  113  4.0000000000000004e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  30.54 
 
 
253 aa  112  9e-24  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_008254  Meso_3540  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
258 aa  112  9e-24  Chelativorans sp. BNC1  Bacteria  normal  0.853389  n/a   
 
 
-
 
NC_013595  Sros_1818  ABC transporter, permease protein  33.88 
 
 
263 aa  111  1.0000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.493092 
 
 
-
 
NC_009485  BBta_5985  putative ABC transporter (permease protein)  32.49 
 
 
255 aa  111  2.0000000000000002e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.209656 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  28.03 
 
 
271 aa  110  2.0000000000000002e-23  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
265 aa  110  2.0000000000000002e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_44530  Binding-protein-dependent transport systems inner membrane component  33.05 
 
 
259 aa  110  2.0000000000000002e-23  Azotobacter vinelandii DJ  Bacteria  normal  0.0634098  n/a   
 
 
-
 
NC_013757  Gobs_2478  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
285 aa  110  4.0000000000000004e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3875  binding-protein-dependent transport systems inner membrane component  29.3 
 
 
289 aa  109  5e-23  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  31.91 
 
 
266 aa  109  5e-23  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_012791  Vapar_1899  binding-protein-dependent transport systems inner membrane component  33.01 
 
 
275 aa  108  1e-22  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0102  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
263 aa  108  1e-22  Variovorax paradoxus S110  Bacteria  normal  0.922239  n/a   
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  30.68 
 
 
283 aa  108  1e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3747  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
254 aa  107  2e-22  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
254 aa  107  2e-22  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  31.33 
 
 
306 aa  107  3e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_009620  Smed_4214  binding-protein-dependent transport systems inner membrane component  33.91 
 
 
281 aa  106  4e-22  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0834  binding-protein-dependent transport systems inner membrane component  29.29 
 
 
264 aa  107  4e-22  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_0145  binding-protein-dependent transport systems inner membrane component  27.95 
 
 
266 aa  106  5e-22  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  31.67 
 
 
290 aa  106  6e-22  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0153  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
277 aa  105  6e-22  Brachyspira murdochii DSM 12563  Bacteria  normal  0.589472  n/a   
 
 
-
 
NC_009485  BBta_5984  putative ABC transporter (permease protein)  37.13 
 
 
255 aa  105  9e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.27636 
 
 
-
 
NC_012560  Avin_21600  aliphatic sulfonates ABC transporter, inner membrane component  29.5 
 
 
284 aa  104  1e-21  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3035  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
298 aa  105  1e-21  Arthrobacter sp. FB24  Bacteria  normal  0.30367  n/a   
 
 
-
 
NC_008786  Veis_0386  binding-protein-dependent transport systems inner membrane component  32.77 
 
 
266 aa  105  1e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.314921 
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  34.05 
 
 
277 aa  104  2e-21  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_011658  BCAH187_A3058  taurine ABC transporter, permease protein  26.83 
 
 
274 aa  103  4e-21  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0456  binding-protein dependent transport system inner membrane protein  35.64 
 
 
285 aa  103  4e-21  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  33.62 
 
 
277 aa  103  5e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_013205  Aaci_2846  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
260 aa  103  5e-21  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000143494  n/a   
 
 
-
 
NC_013093  Amir_5422  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
269 aa  102  6e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1812  ABC transporter, permease protein  31.82 
 
 
257 aa  102  8e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  0.554956  normal  0.627316 
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  30.89 
 
 
259 aa  102  9e-21  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_008254  Meso_3539  binding-protein-dependent transport systems inner membrane component  32.72 
 
 
253 aa  102  9e-21  Chelativorans sp. BNC1  Bacteria  normal  0.158821  n/a   
 
 
-
 
NC_004578  PSPTO_2787  ABC transporter, permease protein  29.69 
 
 
282 aa  102  1e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0328614  n/a   
 
 
-
 
NC_007005  Psyr_2515  binding-protein dependent transport system inner membrane protein  31.15 
 
 
282 aa  102  1e-20  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.313862  normal 
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
281 aa  101  1e-20  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_009512  Pput_2098  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
251 aa  101  2e-20  Pseudomonas putida F1  Bacteria  normal  normal  0.660602 
 
 
-
 
NC_009715  CCV52592_1129  taurine transport system permease protein TauC  32.92 
 
 
241 aa  101  2e-20  Campylobacter curvus 525.92  Bacteria  normal  0.774255  n/a   
 
 
-
 
NC_009720  Xaut_1210  binding-protein-dependent transport systems inner membrane component  29.22 
 
 
315 aa  101  2e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6387  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
283 aa  101  2e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.199649  normal  0.0607956 
 
 
-
 
NC_008688  Pden_5126  binding-protein-dependent transport systems inner membrane component  35.18 
 
 
280 aa  100  2e-20  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  26.92 
 
 
256 aa  101  2e-20  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3635  binding-protein-dependent transport systems inner membrane component  31.86 
 
 
251 aa  100  3e-20  Pseudomonas putida KT2440  Bacteria  normal  0.606268  normal  0.873181 
 
 
-
 
NC_009077  Mjls_5729  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
263 aa  100  3e-20  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
255 aa  100  3e-20  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_008146  Mmcs_5350  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
263 aa  100  3e-20  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5439  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
263 aa  100  3e-20  Mycobacterium sp. KMS  Bacteria  normal  normal  0.56019 
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  31.97 
 
 
279 aa  100  4e-20  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_014150  Bmur_1575  binding-protein-dependent transport systems inner membrane component  26.61 
 
 
266 aa  100  4e-20  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0213  binding-protein-dependent transport systems inner membrane component  29.88 
 
 
252 aa  99.8  5e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1476  binding-protein-dependent transport systems inner membrane component  30.05 
 
 
253 aa  99.8  5e-20  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0444  binding-protein-dependent transport systems inner membrane component  29.56 
 
 
253 aa  99.8  5e-20  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_013510  Tcur_1455  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
269 aa  99.4  6e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0865715  n/a   
 
 
-
 
NC_009485  BBta_6360  putative sulfonate ABC transporter, permease protein  28.86 
 
 
267 aa  99.4  7e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.821284  normal 
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  30.54 
 
 
286 aa  99.4  7e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_006274  BCZK2748  sulfonate/taurine ABC transporter permease  28.1 
 
 
274 aa  99  8e-20  Bacillus cereus E33L  Bacteria  normal  0.947189  n/a   
 
 
-
 
NC_014158  Tpau_2979  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
296 aa  99  9e-20  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  28.36 
 
 
273 aa  99  9e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  28.36 
 
 
273 aa  99  9e-20  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  29.22 
 
 
277 aa  99  9e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_008687  Pden_4108  binding-protein-dependent transport systems inner membrane component  31.46 
 
 
283 aa  99  9e-20  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_3060  taurine ABC transporter, permease protein  28.1 
 
 
274 aa  98.6  1e-19  Bacillus cereus ATCC 10987  Bacteria  normal  0.0244271  n/a   
 
 
-
 
NC_013161  Cyan8802_2597  nitrate ABC transporter, inner membrane subunit  26.53 
 
 
280 aa  98.2  1e-19  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4541  binding-protein-dependent transport systems inner membrane component  34.34 
 
 
283 aa  98.2  1e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.193679 
 
 
-
 
NC_007778  RPB_1482  binding-protein dependent transport system inner membrane protein  30.34 
 
 
253 aa  98.6  1e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4060  binding-protein dependent transport system inner membrane protein  27.64 
 
 
256 aa  99  1e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2935  binding-protein-dependent transport systems inner membrane component  30.48 
 
 
252 aa  98.2  1e-19  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009135  MmarC5_0393  binding-protein-dependent transport systems inner membrane component  29.56 
 
 
253 aa  98.6  1e-19  Methanococcus maripaludis C5  Archaea  normal  0.0876322  n/a   
 
 
-
 
NC_011726  PCC8801_3520  nitrate ABC transporter, inner membrane subunit  26.12 
 
 
280 aa  97.4  2e-19  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_3295  binding-protein dependent transport system inner membrane protein  32.19 
 
 
279 aa  97.4  2e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  32.16 
 
 
319 aa  97.8  2e-19  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
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