Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34310 |
Symbol | |
ID | 8388755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3734433 |
End bp | 3735203 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644977453 |
Product | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
Protein accession | YP_003135222 |
Protein GI | 257057390 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCTCTT TAGTACGCAA CTTCGCCGGC CTGATCGCCT TCCTGCTTCT GTGGGAACTG GTGGTCAGGC TCGGCGTGAT CGCAGAGGAA GATGTACCAC CCGCGTCCGT CGTACTGACC AGGATCGCGG AACTTTTCGG CCAGGAAGCA TTCCTGCGTG ATGTGATCGC CAGCGTCCTG GCGTGGCTGA TCGCTCTGGG AATCGCCATA GTGATCGCCA TACCGTTGGG TCTCGTACTG GGGAACTTCC CCCTGGTTCG CATGGCGACC CGGTCGATCG TCGAGTTCCT CAGGCCCATC CCCTCGGTGG CGCTGATCCC CCTCGTGCTG GTGGTGATCG GCGGTGGTCC GGAGGCGAAG ATCACGTTGG CGGTCTACGC CGCCGTGTGG CCGATCCTCT ACAACACCAT CTACGCCTTC GACGAGATCG ATCCCCTGCT CATCGACACC GCACGGTCGT GCGGTGTGCA CAAGTCGGGA ATCCTCACCA CCGTGGCGTT GCCGCACGCG GCTCCATTCG TGTTCACCGG CATTCGCATC TCCGCCTCGG TGGGACTCAT CGTCATCGTC AGCACGGAAT TCATCGCGGG TGCCAACGTC GGGCTCGGCA GCTTCATCCT GAAAGCCGCA CACGGCGCGG GCCGGACGGA CCTGGTGCTC GCGGGCACCG TGGTGGCGGG CGTGATCGGC TACCTCGCCA ACGAGGGCCT GGAACGGCTC GGCGGAAAGC TGTTCAAGTG GCACAAGGCG ACCACGGCGG AGGTGGCATG A
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Protein sequence | MRSLVRNFAG LIAFLLLWEL VVRLGVIAEE DVPPASVVLT RIAELFGQEA FLRDVIASVL AWLIALGIAI VIAIPLGLVL GNFPLVRMAT RSIVEFLRPI PSVALIPLVL VVIGGGPEAK ITLAVYAAVW PILYNTIYAF DEIDPLLIDT ARSCGVHKSG ILTTVALPHA APFVFTGIRI SASVGLIVIV STEFIAGANV GLGSFILKAA HGAGRTDLVL AGTVVAGVIG YLANEGLERL GGKLFKWHKA TTAEVA
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