Gene Svir_34310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34310 
Symbol 
ID8388755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3734433 
End bp3735203 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID644977453 
ProductABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
Protein accessionYP_003135222 
Protein GI257057390 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTCTT TAGTACGCAA CTTCGCCGGC CTGATCGCCT TCCTGCTTCT GTGGGAACTG 
GTGGTCAGGC TCGGCGTGAT CGCAGAGGAA GATGTACCAC CCGCGTCCGT CGTACTGACC
AGGATCGCGG AACTTTTCGG CCAGGAAGCA TTCCTGCGTG ATGTGATCGC CAGCGTCCTG
GCGTGGCTGA TCGCTCTGGG AATCGCCATA GTGATCGCCA TACCGTTGGG TCTCGTACTG
GGGAACTTCC CCCTGGTTCG CATGGCGACC CGGTCGATCG TCGAGTTCCT CAGGCCCATC
CCCTCGGTGG CGCTGATCCC CCTCGTGCTG GTGGTGATCG GCGGTGGTCC GGAGGCGAAG
ATCACGTTGG CGGTCTACGC CGCCGTGTGG CCGATCCTCT ACAACACCAT CTACGCCTTC
GACGAGATCG ATCCCCTGCT CATCGACACC GCACGGTCGT GCGGTGTGCA CAAGTCGGGA
ATCCTCACCA CCGTGGCGTT GCCGCACGCG GCTCCATTCG TGTTCACCGG CATTCGCATC
TCCGCCTCGG TGGGACTCAT CGTCATCGTC AGCACGGAAT TCATCGCGGG TGCCAACGTC
GGGCTCGGCA GCTTCATCCT GAAAGCCGCA CACGGCGCGG GCCGGACGGA CCTGGTGCTC
GCGGGCACCG TGGTGGCGGG CGTGATCGGC TACCTCGCCA ACGAGGGCCT GGAACGGCTC
GGCGGAAAGC TGTTCAAGTG GCACAAGGCG ACCACGGCGG AGGTGGCATG A
 
Protein sequence
MRSLVRNFAG LIAFLLLWEL VVRLGVIAEE DVPPASVVLT RIAELFGQEA FLRDVIASVL 
AWLIALGIAI VIAIPLGLVL GNFPLVRMAT RSIVEFLRPI PSVALIPLVL VVIGGGPEAK
ITLAVYAAVW PILYNTIYAF DEIDPLLIDT ARSCGVHKSG ILTTVALPHA APFVFTGIRI
SASVGLIVIV STEFIAGANV GLGSFILKAA HGAGRTDLVL AGTVVAGVIG YLANEGLERL
GGKLFKWHKA TTAEVA