More than 300 homologs were found in PanDaTox collection
for query gene Svir_34310 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_34310  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  100 
 
 
256 aa  493  1e-139  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5423  binding-protein-dependent transport systems inner membrane component  59.51 
 
 
298 aa  280  1e-74  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1813  ABC transporter membrane protein  44.71 
 
 
256 aa  181  1e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.48548  normal  0.635137 
 
 
-
 
NC_013510  Tcur_4670  binding-protein-dependent transport systems inner membrane component  39.22 
 
 
259 aa  164  1.0000000000000001e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1819  ABC-type transporter, permease protein  41.39 
 
 
262 aa  154  2e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.240116 
 
 
-
 
NC_008541  Arth_3082  binding-protein-dependent transport systems inner membrane component  38 
 
 
280 aa  153  2e-36  Arthrobacter sp. FB24  Bacteria  normal  0.0593827  n/a   
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  35.1 
 
 
272 aa  130  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  31.84 
 
 
272 aa  127  2.0000000000000002e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_013947  Snas_2331  binding-protein-dependent transport systems inner membrane component  39.33 
 
 
261 aa  123  4e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
285 aa  122  8e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  32.69 
 
 
278 aa  121  9e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_011832  Mpal_1145  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
279 aa  119  3.9999999999999996e-26  Methanosphaerula palustris E1-9c  Archaea  normal  0.208956  normal 
 
 
-
 
NC_013159  Svir_18130  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.06 
 
 
283 aa  117  1.9999999999999998e-25  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0287  binding-protein-dependent transport systems inner membrane component  35.08 
 
 
286 aa  116  3.9999999999999997e-25  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.122201  hitchhiker  0.000327752 
 
 
-
 
NC_007333  Tfu_1692  putative ABC transporter membrane protein  35.39 
 
 
281 aa  115  6e-25  Thermobifida fusca YX  Bacteria  hitchhiker  0.00465779  n/a   
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  32.68 
 
 
253 aa  114  1.0000000000000001e-24  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
273 aa  113  2.0000000000000002e-24  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
273 aa  114  2.0000000000000002e-24  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
273 aa  113  2.0000000000000002e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_2012  binding-protein-dependent transport systems inner membrane component  29.72 
 
 
280 aa  113  3e-24  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.338733  normal  0.193625 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  32.21 
 
 
273 aa  112  4.0000000000000004e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  33.7 
 
 
254 aa  111  1.0000000000000001e-23  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0145  binding-protein-dependent transport systems inner membrane component  30.58 
 
 
266 aa  111  1.0000000000000001e-23  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_4937  binding-protein-dependent transport systems inner membrane component  32.77 
 
 
287 aa  110  2.0000000000000002e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0773955  normal 
 
 
-
 
NC_008254  Meso_3540  binding-protein-dependent transport systems inner membrane component  32.91 
 
 
258 aa  110  2.0000000000000002e-23  Chelativorans sp. BNC1  Bacteria  normal  0.853389  n/a   
 
 
-
 
NC_013757  Gobs_2478  binding-protein-dependent transport systems inner membrane component  36.32 
 
 
285 aa  109  4.0000000000000004e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  27.78 
 
 
306 aa  108  9.000000000000001e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_011830  Dhaf_3643  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
252 aa  108  1e-22  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000799696  n/a   
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  30.71 
 
 
271 aa  107  2e-22  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  31.2 
 
 
274 aa  107  2e-22  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_44530  Binding-protein-dependent transport systems inner membrane component  31.84 
 
 
259 aa  106  4e-22  Azotobacter vinelandii DJ  Bacteria  normal  0.0634098  n/a   
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  32.92 
 
 
279 aa  105  6e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
CP001509  ECD_00317  taurine transporter subunit  33.33 
 
 
275 aa  105  7e-22  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3261  taurine transporter subunit  33.33 
 
 
275 aa  105  7e-22  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_00321  hypothetical protein  33.33 
 
 
275 aa  105  7e-22  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1899  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
275 aa  104  1e-21  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
265 aa  105  1e-21  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0102  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
263 aa  104  1e-21  Variovorax paradoxus S110  Bacteria  normal  0.922239  n/a   
 
 
-
 
NC_013595  Sros_1818  ABC transporter, permease protein  32.26 
 
 
263 aa  104  2e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.493092 
 
 
-
 
NC_009800  EcHS_A0431  taurine transporter subunit  32.54 
 
 
275 aa  102  6e-21  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3240  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
275 aa  102  8e-21  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  30.13 
 
 
256 aa  102  9e-21  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3035  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
298 aa  101  9e-21  Arthrobacter sp. FB24  Bacteria  normal  0.30367  n/a   
 
 
-
 
NC_009801  EcE24377A_0391  taurine transporter subunit  32.54 
 
 
275 aa  101  1e-20  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5728  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
271 aa  101  1e-20  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5349  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
271 aa  101  1e-20  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5438  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
271 aa  101  1e-20  Mycobacterium sp. KMS  Bacteria  normal  normal  0.586381 
 
 
-
 
NC_011353  ECH74115_0442  taurine transporter subunit  32.54 
 
 
275 aa  100  2e-20  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
277 aa  100  2e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_009135  MmarC5_0393  binding-protein-dependent transport systems inner membrane component  30.37 
 
 
253 aa  100  2e-20  Methanococcus maripaludis C5  Archaea  normal  0.0876322  n/a   
 
 
-
 
NC_009975  MmarC6_1476  binding-protein-dependent transport systems inner membrane component  30 
 
 
253 aa  100  2e-20  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_008062  Bcen_6102  binding-protein-dependent transport systems inner membrane component  30.49 
 
 
291 aa  100  2e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2953  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
294 aa  100  2e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1975  binding-protein-dependent transport systems inner membrane component  30.49 
 
 
291 aa  100  2e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  0.690359  n/a   
 
 
-
 
NC_009485  BBta_5985  putative ABC transporter (permease protein)  31.69 
 
 
255 aa  100  2e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.209656 
 
 
-
 
NC_007778  RPB_2837  binding-protein dependent transport system inner membrane protein  32.79 
 
 
266 aa  100  3e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.115716  normal 
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
255 aa  100  3e-20  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_009637  MmarC7_0444  binding-protein-dependent transport systems inner membrane component  28.8 
 
 
253 aa  99.8  4e-20  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009483  Gura_3875  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
289 aa  99.4  6e-20  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012854  Rleg_6387  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
283 aa  99  7e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.199649  normal  0.0607956 
 
 
-
 
NC_009832  Spro_4564  taurine transporter subunit  31.35 
 
 
279 aa  99  7e-20  Serratia proteamaculans 568  Bacteria  normal  normal  0.746145 
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  31.86 
 
 
266 aa  99  7e-20  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  30.2 
 
 
277 aa  99  7e-20  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_007355  Mbar_A1031  sulfonate ABC transporter, permease protein  28.81 
 
 
261 aa  98.6  9e-20  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  31.28 
 
 
274 aa  98.6  9e-20  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_010508  Bcenmc03_1999  binding-protein-dependent transport systems inner membrane component  30.49 
 
 
291 aa  98.6  9e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  28.46 
 
 
260 aa  98.2  1e-19  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_009620  Smed_4214  binding-protein-dependent transport systems inner membrane component  29.75 
 
 
281 aa  98.2  1e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  30.68 
 
 
269 aa  97.8  1e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4060  binding-protein dependent transport system inner membrane protein  29.71 
 
 
256 aa  98.6  1e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E0280  taurine transporter subunit  32.14 
 
 
275 aa  98.2  1e-19  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  29 
 
 
255 aa  98.2  1e-19  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  30.68 
 
 
269 aa  98.2  1e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4541  binding-protein-dependent transport systems inner membrane component  31.9 
 
 
283 aa  97.4  2e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.193679 
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  28.64 
 
 
305 aa  97.1  2e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  27.39 
 
 
319 aa  97.4  2e-19  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  31.67 
 
 
261 aa  97.4  2e-19  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_009379  Pnuc_1186  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
257 aa  97.8  2e-19  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.409709  n/a   
 
 
-
 
NC_008688  Pden_5126  binding-protein-dependent transport systems inner membrane component  31.86 
 
 
280 aa  97.8  2e-19  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  31.68 
 
 
269 aa  97.8  2e-19  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  29.95 
 
 
258 aa  97.4  2e-19  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
257 aa  96.7  3e-19  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_012917  PC1_3747  binding-protein-dependent transport systems inner membrane component  28.44 
 
 
254 aa  97.1  3e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1261  binding-protein-dependent transport systems inner membrane component  33.14 
 
 
293 aa  96.7  3e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.113651  normal 
 
 
-
 
NC_009656  PSPA7_1171  taurine ABC transporter permease  33.79 
 
 
272 aa  97.1  3e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  0.104716  n/a   
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  32.34 
 
 
285 aa  96.3  4e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_0722  binding-protein-dependent transport systems inner membrane component  28.99 
 
 
272 aa  96.3  4e-19  Frankia sp. EAN1pec  Bacteria  normal  0.0102858  normal  0.0961586 
 
 
-
 
NC_014150  Bmur_1575  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
266 aa  95.9  5e-19  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3058  taurine ABC transporter, permease protein  31.25 
 
 
274 aa  95.9  6e-19  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2677  putative ABC transporter, permease protein  31.43 
 
 
255 aa  95.9  6e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.58951 
 
 
-
 
NC_007955  Mbur_2132  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  29.36 
 
 
262 aa  95.9  6e-19  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
279 aa  95.5  7e-19  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_007974  Rmet_4332  ABC transporter permease  28.46 
 
 
298 aa  95.5  7e-19  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_12960  taurine ABC transporter permease  36.6 
 
 
272 aa  95.5  7e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.299757  normal  0.321121 
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  30.21 
 
 
286 aa  95.5  7e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_010505  Mrad2831_4568  binding-protein-dependent transport systems inner membrane component  32.35 
 
 
286 aa  95.5  8e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2638  ABC sulfonate transporter, inner membrane subunit  29.31 
 
 
279 aa  95.1  9e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.0950643  hitchhiker  0.0000361652 
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  30.43 
 
 
273 aa  95.1  1e-18  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_0377  hypothetical protein  29.11 
 
 
253 aa  94.7  1e-18  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  29.68 
 
 
254 aa  95.1  1e-18  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
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