Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_18130 |
Symbol | |
ID | 8387140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1881059 |
End bp | 1881910 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644975881 |
Product | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
Protein accession | YP_003133663 |
Protein GI | 257055831 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTC CCACGGTACC CGAGAAGAAG ATCGAAATCG GTCGACGAAG CCCCGGCAGC ACCGGGGGCG TCCCCGCTCG CGTGAGCGTG GCCCGTCGAG TCGGATGGGC GCTGTCCGGT GTCCTCGTCC GATCGATCGC GATCCTCGTA CTGCTCGCCG GGTGGGAGTT CGCTCCGGCG GTGGGTCTGG TCGATTCCAC GTTCCTCCCC CCGTTCTCCG AGGTGGTGGT CGAACTCGGT GAGCTGATCG GCAACGGACA ACTCCTCCAG CACGTTCAGG CGAGCCTGAC CCGCTCACTG TCCGGATTCG GGATCGCGGT GGCGATCGCC GTTCCGCTCG GCATCGTGAT CGGTTGGTAC AAGGTGATCT CCGATGTGCT CACGCCACTG GTGCAGTTGT TCCTCAACAC CGCCGCGCTG GCTCTGCTTC CGGTGTTCGT GCTGCTCCTC GGCATCGGCG AGACGTCCAA GATCGCCATC GTGGTCTACG CCTGCACCTG GCCGATCCTG CTCAACACGA TCACCGCGGT GCGCAACGTC GACCCGATCC TGCTGAAGTT GGGCAGATCG TTGAACCTGC CGCCGTTGAC GCTGTTCGGC AAGGTGGTCC TGCCCGCATC GATTCCCACG ATCTTCACCG GCCTCCGGTT GGCCGGGGCG GCCGCGATCG TCGTGGTGAT CGCCGCGGAG ATGGTCGGTG CGAAGGCGGG ACTGGGGTTT CTGATCAACG ATGCGCAGTA CAACTTCGCC GTCCCGTCCA TGTACGCGGG CATCGTGACC ATCGCGGTTG TCGGTGTCGG ATTCAATCAA CTACTCGTCG GTGTCGAACG GCGGTTGACG AGATGGCAGT GA
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Protein sequence | MSAPTVPEKK IEIGRRSPGS TGGVPARVSV ARRVGWALSG VLVRSIAILV LLAGWEFAPA VGLVDSTFLP PFSEVVVELG ELIGNGQLLQ HVQASLTRSL SGFGIAVAIA VPLGIVIGWY KVISDVLTPL VQLFLNTAAL ALLPVFVLLL GIGETSKIAI VVYACTWPIL LNTITAVRNV DPILLKLGRS LNLPPLTLFG KVVLPASIPT IFTGLRLAGA AAIVVVIAAE MVGAKAGLGF LINDAQYNFA VPSMYAGIVT IAVVGVGFNQ LLVGVERRLT RWQ
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