Gene Svir_18130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18130 
Symbol 
ID8387140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1881059 
End bp1881910 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content64% 
IMG OID644975881 
ProductABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
Protein accessionYP_003133663 
Protein GI257055831 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTC CCACGGTACC CGAGAAGAAG ATCGAAATCG GTCGACGAAG CCCCGGCAGC 
ACCGGGGGCG TCCCCGCTCG CGTGAGCGTG GCCCGTCGAG TCGGATGGGC GCTGTCCGGT
GTCCTCGTCC GATCGATCGC GATCCTCGTA CTGCTCGCCG GGTGGGAGTT CGCTCCGGCG
GTGGGTCTGG TCGATTCCAC GTTCCTCCCC CCGTTCTCCG AGGTGGTGGT CGAACTCGGT
GAGCTGATCG GCAACGGACA ACTCCTCCAG CACGTTCAGG CGAGCCTGAC CCGCTCACTG
TCCGGATTCG GGATCGCGGT GGCGATCGCC GTTCCGCTCG GCATCGTGAT CGGTTGGTAC
AAGGTGATCT CCGATGTGCT CACGCCACTG GTGCAGTTGT TCCTCAACAC CGCCGCGCTG
GCTCTGCTTC CGGTGTTCGT GCTGCTCCTC GGCATCGGCG AGACGTCCAA GATCGCCATC
GTGGTCTACG CCTGCACCTG GCCGATCCTG CTCAACACGA TCACCGCGGT GCGCAACGTC
GACCCGATCC TGCTGAAGTT GGGCAGATCG TTGAACCTGC CGCCGTTGAC GCTGTTCGGC
AAGGTGGTCC TGCCCGCATC GATTCCCACG ATCTTCACCG GCCTCCGGTT GGCCGGGGCG
GCCGCGATCG TCGTGGTGAT CGCCGCGGAG ATGGTCGGTG CGAAGGCGGG ACTGGGGTTT
CTGATCAACG ATGCGCAGTA CAACTTCGCC GTCCCGTCCA TGTACGCGGG CATCGTGACC
ATCGCGGTTG TCGGTGTCGG ATTCAATCAA CTACTCGTCG GTGTCGAACG GCGGTTGACG
AGATGGCAGT GA
 
Protein sequence
MSAPTVPEKK IEIGRRSPGS TGGVPARVSV ARRVGWALSG VLVRSIAILV LLAGWEFAPA 
VGLVDSTFLP PFSEVVVELG ELIGNGQLLQ HVQASLTRSL SGFGIAVAIA VPLGIVIGWY
KVISDVLTPL VQLFLNTAAL ALLPVFVLLL GIGETSKIAI VVYACTWPIL LNTITAVRNV
DPILLKLGRS LNLPPLTLFG KVVLPASIPT IFTGLRLAGA AAIVVVIAAE MVGAKAGLGF
LINDAQYNFA VPSMYAGIVT IAVVGVGFNQ LLVGVERRLT RWQ