Gene Sros_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1813 
Symbol 
ID8665091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1936690 
End bp1937460 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC transporter membrane protein 
Protein accessionYP_003337545 
Protein GI271963349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.48548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.635137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCTGC GCAGGACCCG CCGCGGCGTC GCCGGCGTCG CGGTGTGCCT GGCCGTACTG 
GAGACGCTCG GACGCACCGG GCTGATCGAT CCGCTGCTGC TGCCGCTCGC CTCCACCGTG
GTGGCCGGCG TGGCCCGGCT GGCGATCGAC CCGGACTTCC TGGCCGACGC GGGCCACACC
CTCCTGGCCT GCGGCTGCGG GCTGCTGATC GCGGTGGCGG TCGCCGTACC CGCCGGGTTG
CTGCTGGGCA CGGTGCCCAC GGTGGAGAGC GCGCTGCGCC CGCTGATCGA GTTCCTCCGG
CCGATCCCGT CGGTGGCGCT GATCCCGCTC GCCCTGTTCC TGTTCACCGA CGGCACCCAG
GCCAAGGTCG CGCTCATCGT GTTCACCGCG GCCTGGCCAC TGCTGATCAA CACGATGTAC
GGCCTGCGGG AGGTGGACCC GGTGGCCAAG GACACCCTGC GGAGCTTCGG CTTCGGCCCC
CTGGCCGTCG TGGTCCGGGT CTCGCTGCCC AGCGCGGCCC CGTTCGTCGT CACCGGCGTG
CGGATCGCGG CCTCGGTCGC CCTGATCGTG GCGGTGAGCG TGGAACTGGT CGCGGGAGGC
GCCGGGATCG GCACCTTCCT CGGCGACGCC GCGGCCGGGA ACCAGCGGGA CACGATGCTC
GCCGCCGTGC TGTGGACCGG TGTCATCGGC CTGACCGCCA ATACCCTGCT GGTCACGGCC
GAGCACCGGC TGTTCGGCTG GCGTCGCGCC GGGGCCGGGG AGGTCCGGTG A
 
Protein sequence
MSLRRTRRGV AGVAVCLAVL ETLGRTGLID PLLLPLASTV VAGVARLAID PDFLADAGHT 
LLACGCGLLI AVAVAVPAGL LLGTVPTVES ALRPLIEFLR PIPSVALIPL ALFLFTDGTQ
AKVALIVFTA AWPLLINTMY GLREVDPVAK DTLRSFGFGP LAVVVRVSLP SAAPFVVTGV
RIAASVALIV AVSVELVAGG AGIGTFLGDA AAGNQRDTML AAVLWTGVIG LTANTLLVTA
EHRLFGWRRA GAGEVR