Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4214 |
Symbol | |
ID | 5319224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 697302 |
End bp | 698147 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776019 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001312952 |
Protein GI | 150376356 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTGC AGGAACTCGA CAGGTCGATC GTCCACGACG GCGGCAGCGT CAGCGCGAAA GCGGATGAGT ATCTTCGCCG GTCAGGTACA GCCGCCGGTG GCTGGCTGTC GCGCTACGGA CTGCTCATTG CCGTTCTGGC GCTCTGGCAG GCAGCCAGCA CCGCCGGCTG GATCAACCCG GCAGTGTTTC CGTCCGTCGG TGCGATTCTT TCCGCGCTCT GGACGGGAAT TTCCGGCGGA GCCTTGCTCG ATGATATCGC AGTCAGCCTT CAGCGCTCCG GCACCGCCTT CGCCGGCGCT GTCGTCTTGG CTATACCGCT CGGTCTCTTG ATGGGGCAGG TCCGTTCGAT CGAGAACGCG CTCGATCCCG TCCTCCAGCT TTTCCGCCAG ACGTCCGCGC TCGCTCTCTA TCCGGTTTTC ATTCTTCTTC TCGGACTTGG CGAGGCGTCG AAAGTATTCG TCATCTTCTG GGCGACGCTT TTCCCGCTGC TCCTGAGCAC CATCAGCGGG GTCAAGGAGG TGGATTCGAA GCTAATCGAG ATGGCGCGTG TCTACGGGGC GTCGCGTCTG ACGGTATTCC GTCGCGTGGT TCTCCCCGGA GCCGTTCCTT CGATCTTCGT CGGCCTGCGC TTGAGTGCAA CGACCGCCCT GCTGCTGCTG ATCGCTTCCG AGATGATCGG AGCCAACAAG GGCATCGGGT TCCAGGTCAT GAATGCCCAG TACAACTTCC AGATCCCGCT GATGTTTGCG GCGATCTTCA TCCTGGCCGG GCTCGGGCTC CTTTCCAACT ACGCGCTGGT CTTTGCGCAG CGCCGCCTCT GCCGCTGGAG CGACGCCTCG AACTAA
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Protein sequence | MSLQELDRSI VHDGGSVSAK ADEYLRRSGT AAGGWLSRYG LLIAVLALWQ AASTAGWINP AVFPSVGAIL SALWTGISGG ALLDDIAVSL QRSGTAFAGA VVLAIPLGLL MGQVRSIENA LDPVLQLFRQ TSALALYPVF ILLLGLGEAS KVFVIFWATL FPLLLSTISG VKEVDSKLIE MARVYGASRL TVFRRVVLPG AVPSIFVGLR LSATTALLLL IASEMIGANK GIGFQVMNAQ YNFQIPLMFA AIFILAGLGL LSNYALVFAQ RRLCRWSDAS N
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