Gene Smed_4214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4214 
Symbol 
ID5319224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp697302 
End bp698147 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content62% 
IMG OID640776019 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001312952 
Protein GI150376356 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTGC AGGAACTCGA CAGGTCGATC GTCCACGACG GCGGCAGCGT CAGCGCGAAA 
GCGGATGAGT ATCTTCGCCG GTCAGGTACA GCCGCCGGTG GCTGGCTGTC GCGCTACGGA
CTGCTCATTG CCGTTCTGGC GCTCTGGCAG GCAGCCAGCA CCGCCGGCTG GATCAACCCG
GCAGTGTTTC CGTCCGTCGG TGCGATTCTT TCCGCGCTCT GGACGGGAAT TTCCGGCGGA
GCCTTGCTCG ATGATATCGC AGTCAGCCTT CAGCGCTCCG GCACCGCCTT CGCCGGCGCT
GTCGTCTTGG CTATACCGCT CGGTCTCTTG ATGGGGCAGG TCCGTTCGAT CGAGAACGCG
CTCGATCCCG TCCTCCAGCT TTTCCGCCAG ACGTCCGCGC TCGCTCTCTA TCCGGTTTTC
ATTCTTCTTC TCGGACTTGG CGAGGCGTCG AAAGTATTCG TCATCTTCTG GGCGACGCTT
TTCCCGCTGC TCCTGAGCAC CATCAGCGGG GTCAAGGAGG TGGATTCGAA GCTAATCGAG
ATGGCGCGTG TCTACGGGGC GTCGCGTCTG ACGGTATTCC GTCGCGTGGT TCTCCCCGGA
GCCGTTCCTT CGATCTTCGT CGGCCTGCGC TTGAGTGCAA CGACCGCCCT GCTGCTGCTG
ATCGCTTCCG AGATGATCGG AGCCAACAAG GGCATCGGGT TCCAGGTCAT GAATGCCCAG
TACAACTTCC AGATCCCGCT GATGTTTGCG GCGATCTTCA TCCTGGCCGG GCTCGGGCTC
CTTTCCAACT ACGCGCTGGT CTTTGCGCAG CGCCGCCTCT GCCGCTGGAG CGACGCCTCG
AACTAA
 
Protein sequence
MSLQELDRSI VHDGGSVSAK ADEYLRRSGT AAGGWLSRYG LLIAVLALWQ AASTAGWINP 
AVFPSVGAIL SALWTGISGG ALLDDIAVSL QRSGTAFAGA VVLAIPLGLL MGQVRSIENA
LDPVLQLFRQ TSALALYPVF ILLLGLGEAS KVFVIFWATL FPLLLSTISG VKEVDSKLIE
MARVYGASRL TVFRRVVLPG AVPSIFVGLR LSATTALLLL IASEMIGANK GIGFQVMNAQ
YNFQIPLMFA AIFILAGLGL LSNYALVFAQ RRLCRWSDAS N