Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1819 |
Symbol | |
ID | 8665097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1941538 |
End bp | 1942326 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ABC-type transporter, permease protein |
Protein accession | YP_003337551 |
Protein GI | 271963355 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.240116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGGAC GGCGCCTGCT CGACAGCAAA CCGCTCTGCG GCGCCCTCGG CGCCGCAGGG CTGTTCTGTG TCCTGGAGGC AACCGGCCGG ACCGGGCTGA TCAGCCCGAT CGTGTTTCCG CTGGCCTCGA CGGTGCTCGG CCGCGCGGCC GAGCTCGCGA CCGACGCGGA CTTCCTCCTC GACGTCGTCT CGACCCTCGG CGCCTGGGCG CTGGGGCTCC TGCTCACCGT CATGATCGCC GTACCCGCCG GGTTCGTGCT CGGCACCCTG CCGCGTGCGG AGACCGCACT CCGGCCCGTC CTGGAGTTCC TCCGCCCGAT CCCGTCGCTG GCGCTGATCC CGCTGGCGCT CGCCCTGTTC TCCGACAGGT TCGACATGAA GATCACGCTG ATCGTCTACG CCGCCACCTG GCCGGTCCTG ATGAACACGC TGTACGGGCT CAAGGACGTC GATCCGCTCG CCAAGGAGAC GCTGCGCAGC TTCGGGTTCG GCCCGCTGTC CGTGCTGTGG CGGGTGTCGC TGCCGAGCAC CGCGCCGTTC GTCGCCACCG GCGTACGGCT GGCCTCGGCG ATCGCGCTCA TCGTGGCGAT CAGCGTGGAG CTGCTCGCCG GAGGCTCCGA CGGCATCGGC GTCTTCCTCA TCGAGGTGGG CGGCAGCCCC GACGCGATGG TGTACATCAT CGCCACCGCC ATCTGGGCCG GAGTCATCGG CCTGGTCACC GACAGCCTGT TCGTGCTGGC GGAACGGCGG ATCTTCCGCT GGCACACCGC CCGGACCGAG GTGGTCTGA
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Protein sequence | MIGRRLLDSK PLCGALGAAG LFCVLEATGR TGLISPIVFP LASTVLGRAA ELATDADFLL DVVSTLGAWA LGLLLTVMIA VPAGFVLGTL PRAETALRPV LEFLRPIPSL ALIPLALALF SDRFDMKITL IVYAATWPVL MNTLYGLKDV DPLAKETLRS FGFGPLSVLW RVSLPSTAPF VATGVRLASA IALIVAISVE LLAGGSDGIG VFLIEVGGSP DAMVYIIATA IWAGVIGLVT DSLFVLAERR IFRWHTARTE VV
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