Gene Sros_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1819 
Symbol 
ID8665097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1941538 
End bp1942326 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC-type transporter, permease protein 
Protein accessionYP_003337551 
Protein GI271963355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.240116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGAC GGCGCCTGCT CGACAGCAAA CCGCTCTGCG GCGCCCTCGG CGCCGCAGGG 
CTGTTCTGTG TCCTGGAGGC AACCGGCCGG ACCGGGCTGA TCAGCCCGAT CGTGTTTCCG
CTGGCCTCGA CGGTGCTCGG CCGCGCGGCC GAGCTCGCGA CCGACGCGGA CTTCCTCCTC
GACGTCGTCT CGACCCTCGG CGCCTGGGCG CTGGGGCTCC TGCTCACCGT CATGATCGCC
GTACCCGCCG GGTTCGTGCT CGGCACCCTG CCGCGTGCGG AGACCGCACT CCGGCCCGTC
CTGGAGTTCC TCCGCCCGAT CCCGTCGCTG GCGCTGATCC CGCTGGCGCT CGCCCTGTTC
TCCGACAGGT TCGACATGAA GATCACGCTG ATCGTCTACG CCGCCACCTG GCCGGTCCTG
ATGAACACGC TGTACGGGCT CAAGGACGTC GATCCGCTCG CCAAGGAGAC GCTGCGCAGC
TTCGGGTTCG GCCCGCTGTC CGTGCTGTGG CGGGTGTCGC TGCCGAGCAC CGCGCCGTTC
GTCGCCACCG GCGTACGGCT GGCCTCGGCG ATCGCGCTCA TCGTGGCGAT CAGCGTGGAG
CTGCTCGCCG GAGGCTCCGA CGGCATCGGC GTCTTCCTCA TCGAGGTGGG CGGCAGCCCC
GACGCGATGG TGTACATCAT CGCCACCGCC ATCTGGGCCG GAGTCATCGG CCTGGTCACC
GACAGCCTGT TCGTGCTGGC GGAACGGCGG ATCTTCCGCT GGCACACCGC CCGGACCGAG
GTGGTCTGA
 
Protein sequence
MIGRRLLDSK PLCGALGAAG LFCVLEATGR TGLISPIVFP LASTVLGRAA ELATDADFLL 
DVVSTLGAWA LGLLLTVMIA VPAGFVLGTL PRAETALRPV LEFLRPIPSL ALIPLALALF
SDRFDMKITL IVYAATWPVL MNTLYGLKDV DPLAKETLRS FGFGPLSVLW RVSLPSTAPF
VATGVRLASA IALIVAISVE LLAGGSDGIG VFLIEVGGSP DAMVYIIATA IWAGVIGLVT
DSLFVLAERR IFRWHTARTE VV