Gene Meso_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3540 
Symbol 
ID4183063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3814018 
End bp3814794 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content58% 
IMG OID638069435 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_676076 
Protein GI110635868 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.853389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCTCA GTCCGCTTCT GCGGGGAATC GGAGGTCTGC TGGTTTTTGT ACTGGCGTGG 
GAGTTTCTGA TTCAGTCCGG AATGATCCGC TTCCAATATC TTCCTCCGCC GTCGGCGATA
GCGATTGCCT TCAACGAGCT CATAGCAACT CCGACGATGT ATGCGGAAAT GATGCATACG
ATCGGTGCGG CTTTGGGCTC CTGGGTTATC GCGGCCATGA TCGGAATTGT TTTGGGAGCG
GCGCTCGGCC TCTCAAAGTC TCTGCGTACC TATACCATGA CAAGCATCGA GGTACTGCGG
CCACTGCCTC CCGTAGCGCT CATCCCGGTG GCACTGCTGA TGTTCGGCTT TTCCTTGAAG
ACCGAGCTTT TTGTCATTGC GATCCCCGCC ATCTGGCCGA TCCTGGTCGG CACGATGGGC
GGCGTCCTCT CCACATCGAC ACGGCTCAGG GAAGTGGCGA GGTCGCTGAA GCTGCACCGC
AGCGAAATTC TCTTCAAGAT TCTGATTCCC GCCGCCGCTC CCTCGGTTCT TGTGGGTTGC
CGGCTGAGCA TGTCACTCTC GCTGGTCCTC GCCATCGTCG TCGAAATGAT CGGCAATCCG
GAAGGGCTGG GGTATGCGGT GGTCCGCGAG GCACAGGCTC TCAATCCCAA CCTCATGTTC
GCCTATATCA TACTGATCGG CCTTCTGGGC GTTCTCTTCA ACCACTTCCT CGTCGTCGCG
AGCAAGATAT TGCTGCCAGG TGAGTTCCGG CGGCCAAATT CGCTGATGGG GAGGTGA
 
Protein sequence
MKLSPLLRGI GGLLVFVLAW EFLIQSGMIR FQYLPPPSAI AIAFNELIAT PTMYAEMMHT 
IGAALGSWVI AAMIGIVLGA ALGLSKSLRT YTMTSIEVLR PLPPVALIPV ALLMFGFSLK
TELFVIAIPA IWPILVGTMG GVLSTSTRLR EVARSLKLHR SEILFKILIP AAAPSVLVGC
RLSMSLSLVL AIVVEMIGNP EGLGYAVVRE AQALNPNLMF AYIILIGLLG VLFNHFLVVA
SKILLPGEFR RPNSLMGR