More than 300 homologs were found in PanDaTox collection
for query gene Svir_18130 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_18130  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  100 
 
 
283 aa  544  1e-154  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  67.08 
 
 
278 aa  325  4.0000000000000003e-88  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_014211  Ndas_4937  binding-protein-dependent transport systems inner membrane component  58.94 
 
 
287 aa  301  6.000000000000001e-81  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0773955  normal 
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  61.25 
 
 
272 aa  300  1e-80  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  55.73 
 
 
272 aa  289  3e-77  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_007333  Tfu_1692  putative ABC transporter membrane protein  60 
 
 
281 aa  278  6e-74  Thermobifida fusca YX  Bacteria  hitchhiker  0.00465779  n/a   
 
 
-
 
NC_008541  Arth_3035  binding-protein-dependent transport systems inner membrane component  54.38 
 
 
298 aa  276  2e-73  Arthrobacter sp. FB24  Bacteria  normal  0.30367  n/a   
 
 
-
 
NC_011832  Mpal_1145  binding-protein-dependent transport systems inner membrane component  43.07 
 
 
279 aa  231  9e-60  Methanosphaerula palustris E1-9c  Archaea  normal  0.208956  normal 
 
 
-
 
NC_012560  Avin_44530  Binding-protein-dependent transport systems inner membrane component  49.19 
 
 
259 aa  215  7e-55  Azotobacter vinelandii DJ  Bacteria  normal  0.0634098  n/a   
 
 
-
 
NC_009483  Gura_3875  binding-protein-dependent transport systems inner membrane component  45.76 
 
 
289 aa  212  4.9999999999999996e-54  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_2012  binding-protein-dependent transport systems inner membrane component  41.18 
 
 
280 aa  207  1e-52  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.338733  normal  0.193625 
 
 
-
 
NC_012791  Vapar_1899  binding-protein-dependent transport systems inner membrane component  46.46 
 
 
275 aa  198  7e-50  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4214  binding-protein-dependent transport systems inner membrane component  40.66 
 
 
281 aa  192  5e-48  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4541  binding-protein-dependent transport systems inner membrane component  41.09 
 
 
283 aa  186  4e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.193679 
 
 
-
 
NC_012854  Rleg_6387  binding-protein-dependent transport systems inner membrane component  42.16 
 
 
283 aa  184  2.0000000000000003e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.199649  normal  0.0607956 
 
 
-
 
NC_008688  Pden_5126  binding-protein-dependent transport systems inner membrane component  43.64 
 
 
280 aa  177  2e-43  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  37.87 
 
 
290 aa  155  7e-37  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  35.37 
 
 
250 aa  149  5e-35  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  34.44 
 
 
256 aa  147  2.0000000000000003e-34  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  36.28 
 
 
267 aa  144  2e-33  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  36.48 
 
 
259 aa  144  2e-33  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  38.31 
 
 
280 aa  142  7e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  35.98 
 
 
255 aa  141  9.999999999999999e-33  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_013739  Cwoe_3818  binding-protein-dependent transport systems inner membrane component  31.41 
 
 
280 aa  140  3e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.615395  normal  0.42897 
 
 
-
 
NC_013159  Svir_34320  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  35.66 
 
 
273 aa  139  3.9999999999999997e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  34.06 
 
 
255 aa  139  4.999999999999999e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  31.51 
 
 
277 aa  139  7.999999999999999e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  33.92 
 
 
261 aa  139  7.999999999999999e-32  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
258 aa  138  1e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0467  taurine ABC transporter, permease protein, putative  34.19 
 
 
272 aa  135  7.000000000000001e-31  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0406  putative taurine ABC transporter, permease protein  34.19 
 
 
272 aa  135  7.000000000000001e-31  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
281 aa  135  9.999999999999999e-31  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  34.85 
 
 
279 aa  134  1.9999999999999998e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_009485  BBta_6360  putative sulfonate ABC transporter, permease protein  33.76 
 
 
267 aa  134  1.9999999999999998e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.821284  normal 
 
 
-
 
NC_005945  BAS2712  sulfonate ABC transporter permease  32.75 
 
 
282 aa  133  3.9999999999999996e-30  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2920  sulfonate ABC transporter permease protein  32.75 
 
 
282 aa  133  3.9999999999999996e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  34.5 
 
 
286 aa  132  5e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_013093  Amir_5422  binding-protein-dependent transport systems inner membrane component  33.98 
 
 
269 aa  132  5e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1210  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
315 aa  131  1.0000000000000001e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
283 aa  131  1.0000000000000001e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_013595  Sros_1812  ABC transporter, permease protein  32.55 
 
 
257 aa  130  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.554956  normal  0.627316 
 
 
-
 
NC_011004  Rpal_2894  binding-protein-dependent transport systems inner membrane component  35.22 
 
 
280 aa  130  2.0000000000000002e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.42556  n/a   
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  31.09 
 
 
252 aa  130  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_008726  Mvan_3413  binding-protein-dependent transport systems inner membrane component  33.07 
 
 
271 aa  130  2.0000000000000002e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0409101  normal  0.884011 
 
 
-
 
NC_012880  Dd703_1642  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
263 aa  130  3e-29  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  31.33 
 
 
273 aa  130  3e-29  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_009943  Dole_0213  binding-protein-dependent transport systems inner membrane component  34.91 
 
 
252 aa  130  4.0000000000000003e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1673  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
263 aa  129  4.0000000000000003e-29  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0464  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
273 aa  129  4.0000000000000003e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0145  binding-protein-dependent transport systems inner membrane component  31.46 
 
 
266 aa  129  5.0000000000000004e-29  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2787  ABC transporter, permease protein  32.17 
 
 
282 aa  129  6e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0328614  n/a   
 
 
-
 
NC_013595  Sros_1813  ABC transporter membrane protein  33.05 
 
 
256 aa  129  6e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.48548  normal  0.635137 
 
 
-
 
NC_009832  Spro_4564  taurine transporter subunit  34.84 
 
 
279 aa  128  1.0000000000000001e-28  Serratia proteamaculans 568  Bacteria  normal  normal  0.746145 
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  31.58 
 
 
306 aa  128  1.0000000000000001e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_007958  RPD_0114  binding-protein-dependent transport systems inner membrane component  33.91 
 
 
286 aa  128  1.0000000000000001e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.703431 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  32.16 
 
 
273 aa  128  1.0000000000000001e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
273 aa  128  1.0000000000000001e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  32.16 
 
 
273 aa  128  1.0000000000000001e-28  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_002947  PP_3635  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
251 aa  127  2.0000000000000002e-28  Pseudomonas putida KT2440  Bacteria  normal  0.606268  normal  0.873181 
 
 
-
 
NC_009668  Oant_3592  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
273 aa  127  2.0000000000000002e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_5517  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
256 aa  127  2.0000000000000002e-28  Variovorax paradoxus S110  Bacteria  normal  0.16627  n/a   
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  36.89 
 
 
285 aa  127  2.0000000000000002e-28  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_007005  Psyr_2515  binding-protein dependent transport system inner membrane protein  31.4 
 
 
282 aa  127  3e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.313862  normal 
 
 
-
 
NC_010322  PputGB1_0263  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
265 aa  126  3e-28  Pseudomonas putida GB-1  Bacteria  normal  0.791848  normal 
 
 
-
 
NC_009656  PSPA7_1684  ABC transporter permease  36.17 
 
 
262 aa  126  3e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
279 aa  126  4.0000000000000003e-28  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_013421  Pecwa_1800  binding-protein-dependent transport systems inner membrane component  33.87 
 
 
257 aa  126  4.0000000000000003e-28  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  34.94 
 
 
269 aa  126  4.0000000000000003e-28  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_013093  Amir_5423  binding-protein-dependent transport systems inner membrane component  36.09 
 
 
298 aa  126  4.0000000000000003e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
273 aa  126  5e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_007974  Rmet_4332  ABC transporter permease  30.95 
 
 
298 aa  126  5e-28  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3295  binding-protein dependent transport system inner membrane protein  32.89 
 
 
279 aa  125  6e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_34310  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.06 
 
 
256 aa  125  6e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2098  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
251 aa  125  7e-28  Pseudomonas putida F1  Bacteria  normal  normal  0.660602 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  30.28 
 
 
274 aa  125  7e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0024  binding-protein-dependent transport systems inner membrane component  33.91 
 
 
264 aa  125  8.000000000000001e-28  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4973  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
265 aa  124  1e-27  Pseudomonas putida W619  Bacteria  normal  0.0722896  normal  0.022026 
 
 
-
 
NC_002947  PP_0239  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
265 aa  124  1e-27  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00756787 
 
 
-
 
NC_008043  TM1040_3034  binding-protein-dependent transport systems inner membrane component  35.9 
 
 
269 aa  125  1e-27  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  34.68 
 
 
253 aa  125  1e-27  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009512  Pput_0254  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
265 aa  124  1e-27  Pseudomonas putida F1  Bacteria  normal  0.293544  normal  0.0445843 
 
 
-
 
NC_011898  Ccel_0436  binding-protein-dependent transport systems inner membrane component  35.15 
 
 
255 aa  124  1e-27  Clostridium cellulolyticum H10  Bacteria  normal  0.0448966  n/a   
 
 
-
 
NC_010465  YPK_0423  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
264 aa  124  1e-27  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0355  putative ABC aliphatic sulfonates transporter, permease subunit  34.75 
 
 
264 aa  124  1e-27  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0778  binding-protein-dependent transport systems inner membrane component  34.06 
 
 
270 aa  124  2e-27  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0411  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
279 aa  124  2e-27  Methylobacterium populi BJ001  Bacteria  normal  0.760866  normal 
 
 
-
 
NC_009656  PSPA7_1679  ABC transporter permease  33.62 
 
 
274 aa  124  2e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  0.451747  n/a   
 
 
-
 
NC_008463  PA14_19570  ABC transporter permease  35.32 
 
 
262 aa  124  2e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4981  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
279 aa  124  2e-27  Pseudomonas putida W619  Bacteria  normal  normal  0.588836 
 
 
-
 
NC_014165  Tbis_1380  binding-protein-dependent transporter inner membrane component  32.41 
 
 
277 aa  124  2e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.153307 
 
 
-
 
NC_013421  Pecwa_0030  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
264 aa  124  3e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  0.050552  n/a   
 
 
-
 
NC_007947  Mfla_1557  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
272 aa  123  3e-27  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.00127239  hitchhiker  0.00240392 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  30.95 
 
 
273 aa  123  4e-27  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_012560  Avin_21600  aliphatic sulfonates ABC transporter, inner membrane component  30.92 
 
 
284 aa  123  4e-27  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3081  binding-protein-dependent transport systems inner membrane component  32.09 
 
 
257 aa  123  4e-27  Arthrobacter sp. FB24  Bacteria  normal  0.0826963  n/a   
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
264 aa  122  5e-27  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_008541  Arth_3082  binding-protein-dependent transport systems inner membrane component  32.09 
 
 
280 aa  122  5e-27  Arthrobacter sp. FB24  Bacteria  normal  0.0593827  n/a   
 
 
-
 
NC_012917  PC1_3747  binding-protein-dependent transport systems inner membrane component  31.78 
 
 
254 aa  122  5e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0483  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
275 aa  122  6e-27  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_19510  ABC transporter permease  33.19 
 
 
274 aa  122  6e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
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