Gene Pecwa_1800 details

Gene Information

• Locus tag: Pecwa_1800
• ID: 8530198
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1954915
• End bp: 1955688
• Gene Length: 774 bp
• Protein Length: 257 aa
• Translation table: 11
• GC content: 56%
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_003259193
• Protein GI: 261821087

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAAGAA CGTCTTATGT GTTATTGAGC ATCACCTCTG TGGCGGTGGT GCTCGCATTA 
TGGCAGTGGG CGGGGGCGCA GCAGTGGGTG GATCCGCTGT TGCTACCGCC GCTGTCGGAT 
ATTCTCCTGA CTGCGGGGGA ATTAGCGCAA GATGGCTATC GGCAGGTGTC GCTATGGGAA 
CACATTGCCG TCAGTGTTGC TCGAGCGCTG AGCGCCTTCA GCGTCGCCAT TATTCTTGGT 
GTCCCGCTAG GCCTGTTGAT GGGGCTATCG CCTCCGATCG CTGCCGTGTT TAATCCTTTC 
GTTCAGTTTC TGCGACCGTT ACCTAAAATT GCACTGATCC CGCTGGCGGT AGTCTGGTTG 
GGAATTGGCG AAGCATCCAA ATTCTTTCTG ATCTTTATCG CGACTTTTCT CAGCGTTGTG 
GTCGGTGCCT GTGCCGCCGT GGATCGCGTG GAACGTTCCC GTATCCGCGT CGCGCAAACG 
CTCGGCGCAA GCCCTCGCCA GATCTTTCTC CACGTGGTGT TGCCCGATAC GCTACCGGAG 
CTGTTCACTA CGGTGCGGCT GGCTATCGGT GTTGGTTGGA CGTCGCTGAT TGCGGCTGAA 
ATGGTCGCTG CTACCTCGGG TATTGGCTGG ATGGTGATGA ATGCCAGTGC TTATCTGCGT 
ACCGATATTG TCATGTTGGG CATCTTACTA TTGGGGGGGA TTGGCTATGT GCTCGATCTG 
CTACTGGTCG GTGCGCAGCG CATCTTTGTG CCGTGGGCGG GGAAATCATC ATGA 

 

Protein sequence

MKRTSYVLLS ITSVAVVLAL WQWAGAQQWV DPLLLPPLSD ILLTAGELAQ DGYRQVSLWE 
HIAVSVARAL SAFSVAIILG VPLGLLMGLS PPIAAVFNPF VQFLRPLPKI ALIPLAVVWL 
GIGEASKFFL IFIATFLSVV VGACAAVDRV ERSRIRVAQT LGASPRQIFL HVVLPDTLPE 
LFTTVRLAIG VGWTSLIAAE MVAATSGIGW MVMNASAYLR TDIVMLGILL LGGIGYVLDL 
LLVGAQRIFV PWAGKSS