Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3034 |
Symbol | |
ID | 4075739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 1785 |
End bp | 2594 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638004535 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_611270 |
Protein GI | 99078012 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGACA CCTCTCTTTC TCGGCAACCG CTCGAGGTCC GGTTCCGGGG CGGCGGCTTT GCACCGCGCA ATCGCCGTTG GGTCGGGCTG GCCGTTTTTG TGGTGCTGAT CGCGCTGGTC GAATGGGGCA CACGCAGCGG GTTTATTTCC GCGCTCACCC TGCCCAAACC TTCGGATGTC TTTGCGACCC TTGTCGAGCT CTGGCAGTCG GGCCTGTTCT TTCAACACAT GATCCCCTCG TTGACGAGAC TGGCCGTCGG CGCAGCCCTT GGCGCCAGCG TCGGCGTCGG TGTCGGAGTT CTGATCGGCT TGTTTTCCTA CATTCGGGCC GGTTTGGTGC CGCTTATGGC GGCAATTTTC CCGATCCCGA AAATCGCCCT GCTGCCGCTC TTTGTGATCT GGTTCGGGAT TGATGAGGGC TCAAAATACG CGCTGATCGC CTTTGGCACC TTCACCCCGA CGGTGGTTGC CACCTACGGC GCGGTGGACA ATGTGGACCG CTCGCTGATC CGCATGGGGC AGAGTTTCGG CCTGTCGTGG CTCTCGATCG TGCGCAAGAT CGTGCTGCCT GGTGCGATGC CTGGCATTCT CTCCGGTCTG CGCATCAGCC TTGCGATTGC GATTATCCTC TTGGTTGCGG CCGAGATGCT GGGCGCGCAA TACGGGATCG GGGCCTATAT CCTCGAGGCG GGTTCGCTCT ATGATCTGGA ACGTCTGTTT GCGGGCGTCG TGATCCTGTC GCTCTTGGGG GTGCTGACAT CGGGTACGAT TGGCATGATT GAGCGGCGAC TGTTGAACTG GCGGTCCTGA
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Protein sequence | MSDTSLSRQP LEVRFRGGGF APRNRRWVGL AVFVVLIALV EWGTRSGFIS ALTLPKPSDV FATLVELWQS GLFFQHMIPS LTRLAVGAAL GASVGVGVGV LIGLFSYIRA GLVPLMAAIF PIPKIALLPL FVIWFGIDEG SKYALIAFGT FTPTVVATYG AVDNVDRSLI RMGQSFGLSW LSIVRKIVLP GAMPGILSGL RISLAIAIIL LVAAEMLGAQ YGIGAYILEA GSLYDLERLF AGVVILSLLG VLTSGTIGMI ERRLLNWRS
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