Gene PC1_3747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3747 
Symbol 
ID8134728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4232829 
End bp4233593 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content52% 
IMG OID644867048 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003019298 
Protein GI253690108 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCAGC ACTGGACGTC TAAATTATTA CCCGCTGTCG GTCCGATTCT GCTGTTTCTC 
TTTTGGCAGT TGGCGGTCAG CGCGAAATGG CTTAACCCCA TTTTATTACC GTCGCCGGTC
GACACGTTGA GCTATATGTT CCAGTCCTTC GCGGATGCCA GCATGCGTAC GGATATCGGC
GCGACGCTAT ACCGTACGCT CGCCGCATTT GGCTTTGCGG CACTGATTGG CGTGCCGCTC
GGCGTTATTC TCGGCAGCAA TGAAAAGATC TACCGTAGCC TGGAGTTTCT GATCGATTTC
TTCCGCTCTA CGCCATCGTC AGCGCTGATT CCGCTATTTT TGCTGATTTT CGGGATAACC
GACGCGAATA AAATTGCCAT TTCGGCCTTT GCGGCCGTGC TGGTGATTCT GTTCAACAGC
GCCTATGGCG TGATGAATGC CAAGAAAACC CGTCTGATGG CGGCACAGGT CATGGGGATC
TCTCGCTGGC ATATTTTTAA AGACATCATG CTGCTGGAAA GTCTGGCGCA AACTTTTGTC
GGCTTGCGTA CCGGTGTGTC GATGGCGTTG GTGATTGTGA TTGTCGCGGA GATGTTTATT
GGCTCAGAAA CCGGGCTGGG GCATCGAATC ATCGATGCAC AACAGGTGTT CAACATCCGG
GATATGTACG CCTCTATCCT GATTACGGGC GCACTGGGAT ATCTGCTTAA CGTGCTGTTT
CTTATCGTAG AAAAACGAAT TGTTCACTGG AGTGGCAAAG CATGA
 
Protein sequence
MRQHWTSKLL PAVGPILLFL FWQLAVSAKW LNPILLPSPV DTLSYMFQSF ADASMRTDIG 
ATLYRTLAAF GFAALIGVPL GVILGSNEKI YRSLEFLIDF FRSTPSSALI PLFLLIFGIT
DANKIAISAF AAVLVILFNS AYGVMNAKKT RLMAAQVMGI SRWHIFKDIM LLESLAQTFV
GLRTGVSMAL VIVIVAEMFI GSETGLGHRI IDAQQVFNIR DMYASILITG ALGYLLNVLF
LIVEKRIVHW SGKA