Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3747 |
Symbol | |
ID | 8134728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4232829 |
End bp | 4233593 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644867048 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003019298 |
Protein GI | 253690108 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCAGC ACTGGACGTC TAAATTATTA CCCGCTGTCG GTCCGATTCT GCTGTTTCTC TTTTGGCAGT TGGCGGTCAG CGCGAAATGG CTTAACCCCA TTTTATTACC GTCGCCGGTC GACACGTTGA GCTATATGTT CCAGTCCTTC GCGGATGCCA GCATGCGTAC GGATATCGGC GCGACGCTAT ACCGTACGCT CGCCGCATTT GGCTTTGCGG CACTGATTGG CGTGCCGCTC GGCGTTATTC TCGGCAGCAA TGAAAAGATC TACCGTAGCC TGGAGTTTCT GATCGATTTC TTCCGCTCTA CGCCATCGTC AGCGCTGATT CCGCTATTTT TGCTGATTTT CGGGATAACC GACGCGAATA AAATTGCCAT TTCGGCCTTT GCGGCCGTGC TGGTGATTCT GTTCAACAGC GCCTATGGCG TGATGAATGC CAAGAAAACC CGTCTGATGG CGGCACAGGT CATGGGGATC TCTCGCTGGC ATATTTTTAA AGACATCATG CTGCTGGAAA GTCTGGCGCA AACTTTTGTC GGCTTGCGTA CCGGTGTGTC GATGGCGTTG GTGATTGTGA TTGTCGCGGA GATGTTTATT GGCTCAGAAA CCGGGCTGGG GCATCGAATC ATCGATGCAC AACAGGTGTT CAACATCCGG GATATGTACG CCTCTATCCT GATTACGGGC GCACTGGGAT ATCTGCTTAA CGTGCTGTTT CTTATCGTAG AAAAACGAAT TGTTCACTGG AGTGGCAAAG CATGA
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Protein sequence | MRQHWTSKLL PAVGPILLFL FWQLAVSAKW LNPILLPSPV DTLSYMFQSF ADASMRTDIG ATLYRTLAAF GFAALIGVPL GVILGSNEKI YRSLEFLIDF FRSTPSSALI PLFLLIFGIT DANKIAISAF AAVLVILFNS AYGVMNAKKT RLMAAQVMGI SRWHIFKDIM LLESLAQTFV GLRTGVSMAL VIVIVAEMFI GSETGLGHRI IDAQQVFNIR DMYASILITG ALGYLLNVLF LIVEKRIVHW SGKA
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