Gene Psyr_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2515 
Symbol 
ID3368032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2924603 
End bp2925451 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content62% 
IMG OID637652863 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_235592 
Protein GI66045751 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.313862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA GGGACAAGTC GTTGCCTGCC TCAGCGCAGG CAACAGTGCC GGACAAGGCA 
CAACGAACGC TTTGGCAGCG CTACAGAACA CCACTCAAGG GCCTGGTGGT GCCGGCCGTG
ATTATCGTTT TGCTGGAAAT GATCGTACGC ATCGGCTGGC TGCCTGCCTA CCAGATGCCA
GCGCCCAGCG AGATCGTGCT GACCCTGCGC GACCTGGCGG ACGGTGCGTT GTGGAAGCAC
ATCAGCGCCA GTCTGTTGCG TGTGCTCAGC GGCTTTGCGA TCGGTGCGAG TCTGGCCCTG
GTGTTTGCCG CGTGGGTGGG GCTCAGTCGC GAGGCAGAGG CGTATCTGGA GCCTACATTC
GCCGGGCTTC GCTCCATTCC GAGTCTGGCA TGGGTGCCGC TTCTGCTGTT ATGGCTGGGC
ATTGGCGAAA CATCGAAAAT CGTGCTGATT GCCATTGGTG CGTTCTTTCC GGTGTACCTC
AACGGCGTGG CCGCGATTCG AGGCATTGAC CGAAAGCTGG TGGAAGTCGG CCAGATGTAT
GGCTTGAGCC GCTATCGCCT GACCCGGCGC ATTCTTCTGC CCGCCGCCCT GCCCGGCCTG
TTTACCGGTT TGCGCAGCGG CATGAGCCTG TCGTGGATGT TTCTGGTGGC TGCCGAGCTG
ATCGCCGCCA CCAAAGGCCT GGGCTACCTG CTCAGTGACG GGCGCGAAAC CTCGCGTCCG
GACATCGTGC TGGCGGCGAT CATCGTTCTG GCGACACTGG GCAAACTCAG CGACGGCCTG
CTGGCAAGCC TGGAAAAACG CTTCCTGGCC TGGCGCGATA CATTCAACGG GCAAAGCCGT
GAGGGTTGA
 
Protein sequence
MTRRDKSLPA SAQATVPDKA QRTLWQRYRT PLKGLVVPAV IIVLLEMIVR IGWLPAYQMP 
APSEIVLTLR DLADGALWKH ISASLLRVLS GFAIGASLAL VFAAWVGLSR EAEAYLEPTF
AGLRSIPSLA WVPLLLLWLG IGETSKIVLI AIGAFFPVYL NGVAAIRGID RKLVEVGQMY
GLSRYRLTRR ILLPAALPGL FTGLRSGMSL SWMFLVAAEL IAATKGLGYL LSDGRETSRP
DIVLAAIIVL ATLGKLSDGL LASLEKRFLA WRDTFNGQSR EG