More than 300 homologs were found in PanDaTox collection
for query gene Gobs_2478 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_2478  binding-protein-dependent transport systems inner membrane component  100 
 
 
285 aa  541  1e-153  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3082  binding-protein-dependent transport systems inner membrane component  58.06 
 
 
280 aa  286  2e-76  Arthrobacter sp. FB24  Bacteria  normal  0.0593827  n/a   
 
 
-
 
NC_013947  Snas_2331  binding-protein-dependent transport systems inner membrane component  63.29 
 
 
261 aa  244  1.9999999999999999e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0287  binding-protein-dependent transport systems inner membrane component  55.1 
 
 
286 aa  229  4e-59  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.122201  hitchhiker  0.000327752 
 
 
-
 
NC_008146  Mmcs_5349  binding-protein-dependent transport systems inner membrane component  46.75 
 
 
271 aa  189  2.9999999999999997e-47  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5438  binding-protein-dependent transport systems inner membrane component  46.75 
 
 
271 aa  189  2.9999999999999997e-47  Mycobacterium sp. KMS  Bacteria  normal  normal  0.586381 
 
 
-
 
NC_009077  Mjls_5728  binding-protein-dependent transport systems inner membrane component  46.75 
 
 
271 aa  189  2.9999999999999997e-47  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1813  ABC transporter membrane protein  38.06 
 
 
256 aa  149  6e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.48548  normal  0.635137 
 
 
-
 
NC_013159  Svir_34310  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  36.84 
 
 
256 aa  142  5e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5423  binding-protein-dependent transport systems inner membrane component  37.2 
 
 
298 aa  140  3e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3081  binding-protein-dependent transport systems inner membrane component  34.82 
 
 
257 aa  133  3e-30  Arthrobacter sp. FB24  Bacteria  normal  0.0826963  n/a   
 
 
-
 
NC_013510  Tcur_4670  binding-protein-dependent transport systems inner membrane component  39.47 
 
 
259 aa  132  3.9999999999999996e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  33.64 
 
 
258 aa  118  9.999999999999999e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1819  ABC-type transporter, permease protein  37.85 
 
 
262 aa  117  9.999999999999999e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.240116 
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
265 aa  114  1.0000000000000001e-24  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
255 aa  115  1.0000000000000001e-24  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_013159  Svir_34320  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.6 
 
 
273 aa  115  1.0000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
278 aa  114  2.0000000000000002e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_011832  Mpal_1145  binding-protein-dependent transport systems inner membrane component  31.71 
 
 
279 aa  114  2.0000000000000002e-24  Methanosphaerula palustris E1-9c  Archaea  normal  0.208956  normal 
 
 
-
 
NC_008786  Veis_0386  binding-protein-dependent transport systems inner membrane component  34.9 
 
 
266 aa  114  2.0000000000000002e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.314921 
 
 
-
 
NC_008254  Meso_3540  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
258 aa  112  6e-24  Chelativorans sp. BNC1  Bacteria  normal  0.853389  n/a   
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  32.81 
 
 
272 aa  112  6e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_009485  BBta_5984  putative ABC transporter (permease protein)  39.2 
 
 
255 aa  110  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.27636 
 
 
-
 
NC_012791  Vapar_0102  binding-protein-dependent transport systems inner membrane component  34.62 
 
 
263 aa  110  3e-23  Variovorax paradoxus S110  Bacteria  normal  0.922239  n/a   
 
 
-
 
NC_011004  Rpal_2882  binding-protein-dependent transport systems inner membrane component  31.05 
 
 
268 aa  109  4.0000000000000004e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.80309  n/a   
 
 
-
 
NC_013595  Sros_1812  ABC transporter, permease protein  35.68 
 
 
257 aa  108  1e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  0.554956  normal  0.627316 
 
 
-
 
NC_009485  BBta_5985  putative ABC transporter (permease protein)  36.17 
 
 
255 aa  107  2e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.209656 
 
 
-
 
NC_011830  Dhaf_3643  binding-protein-dependent transport systems inner membrane component  29.36 
 
 
252 aa  107  2e-22  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000799696  n/a   
 
 
-
 
NC_008254  Meso_3539  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
253 aa  106  5e-22  Chelativorans sp. BNC1  Bacteria  normal  0.158821  n/a   
 
 
-
 
NC_013093  Amir_5422  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
269 aa  105  7e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
270 aa  105  8e-22  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0239  binding-protein-dependent transport systems inner membrane component  30.26 
 
 
265 aa  105  9e-22  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00756787 
 
 
-
 
NC_010581  Bind_2437  binding-protein-dependent transport systems inner membrane component  32.92 
 
 
278 aa  105  9e-22  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0254  binding-protein-dependent transport systems inner membrane component  30.26 
 
 
265 aa  104  1e-21  Pseudomonas putida F1  Bacteria  normal  0.293544  normal  0.0445843 
 
 
-
 
NC_008146  Mmcs_5350  binding-protein-dependent transport systems inner membrane component  35.67 
 
 
263 aa  105  1e-21  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5439  binding-protein-dependent transport systems inner membrane component  35.67 
 
 
263 aa  105  1e-21  Mycobacterium sp. KMS  Bacteria  normal  normal  0.56019 
 
 
-
 
NC_009077  Mjls_5729  binding-protein-dependent transport systems inner membrane component  35.67 
 
 
263 aa  105  1e-21  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0263  binding-protein-dependent transport systems inner membrane component  30.26 
 
 
265 aa  104  2e-21  Pseudomonas putida GB-1  Bacteria  normal  0.791848  normal 
 
 
-
 
NC_004311  BRA0467  taurine ABC transporter, permease protein, putative  28.73 
 
 
272 aa  104  2e-21  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
302 aa  104  2e-21  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_009972  Haur_2787  binding-protein-dependent transport systems inner membrane component  32.79 
 
 
272 aa  104  2e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.334714  n/a   
 
 
-
 
NC_010501  PputW619_4973  binding-protein-dependent transport systems inner membrane component  30.26 
 
 
265 aa  103  2e-21  Pseudomonas putida W619  Bacteria  normal  0.0722896  normal  0.022026 
 
 
-
 
NC_009504  BOV_A0406  putative taurine ABC transporter, permease protein  28.73 
 
 
272 aa  104  2e-21  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1818  ABC transporter, permease protein  34.38 
 
 
263 aa  103  3e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.493092 
 
 
-
 
NC_007406  Nwi_0683  binding-protein dependent transport system inner membrane protein  30.33 
 
 
268 aa  102  8e-21  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.473028  normal  0.58692 
 
 
-
 
NC_011988  Avi_5468  ABC transporter membrane spanning protein (aliphatic sulphonate)  34.48 
 
 
284 aa  101  1e-20  Agrobacterium vitis S4  Bacteria  normal  0.165676  n/a   
 
 
-
 
NC_014211  Ndas_4937  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
287 aa  102  1e-20  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0773955  normal 
 
 
-
 
NC_010511  M446_5130  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
272 aa  100  2e-20  Methylobacterium sp. 4-46  Bacteria  normal  0.612608  normal  0.0470724 
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  32.39 
 
 
273 aa  100  2e-20  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  32.39 
 
 
273 aa  100  2e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1432  binding-protein-dependent transport systems inner membrane component  31.76 
 
 
260 aa  100  3e-20  Methylobacterium sp. 4-46  Bacteria  normal  0.324199  normal  0.863766 
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  28.4 
 
 
281 aa  99.4  5e-20  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_009428  Rsph17025_0749  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
266 aa  99.8  5e-20  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.534527 
 
 
-
 
NC_013205  Aaci_2846  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
260 aa  99.4  6e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000143494  n/a   
 
 
-
 
NC_011894  Mnod_1056  binding-protein-dependent transport systems inner membrane component  31.13 
 
 
266 aa  99  7e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.498595  n/a   
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  32.02 
 
 
286 aa  99  7e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_012850  Rleg_2304  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
278 aa  99  7e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.37818 
 
 
-
 
NC_009485  BBta_1867  ABC transporter permease  31.43 
 
 
272 aa  99  9e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4371  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
250 aa  98.2  1e-19  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.249078 
 
 
-
 
NC_011757  Mchl_4847  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
250 aa  98.2  1e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  30 
 
 
290 aa  97.8  2e-19  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
277 aa  97.8  2e-19  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_008463  PA14_19570  ABC transporter permease  28.63 
 
 
262 aa  97.8  2e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  32.11 
 
 
272 aa  97.1  3e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_010551  BamMC406_1485  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
270 aa  97.1  3e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1679  ABC transporter permease  33.91 
 
 
274 aa  97.1  3e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  0.451747  n/a   
 
 
-
 
NC_014151  Cfla_0286  binding-protein-dependent transport systems inner membrane component  34.43 
 
 
261 aa  97.1  3e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.122201  hitchhiker  0.000248355 
 
 
-
 
NC_007333  Tfu_1692  putative ABC transporter membrane protein  31.62 
 
 
281 aa  96.3  5e-19  Thermobifida fusca YX  Bacteria  hitchhiker  0.00465779  n/a   
 
 
-
 
NC_009656  PSPA7_1684  ABC transporter permease  28.63 
 
 
262 aa  96.3  5e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3035  binding-protein-dependent transport systems inner membrane component  29.88 
 
 
298 aa  96.3  5e-19  Arthrobacter sp. FB24  Bacteria  normal  0.30367  n/a   
 
 
-
 
NC_012791  Vapar_1899  binding-protein-dependent transport systems inner membrane component  30.18 
 
 
275 aa  95.9  6e-19  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  32.16 
 
 
285 aa  95.9  7e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  29.72 
 
 
271 aa  95.9  7e-19  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_010465  YPK_0423  binding-protein-dependent transport systems inner membrane component  27.94 
 
 
264 aa  95.9  7e-19  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0355  putative ABC aliphatic sulfonates transporter, permease subunit  27.94 
 
 
264 aa  95.9  7e-19  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4522  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
329 aa  95.5  8e-19  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  30.29 
 
 
303 aa  95.5  8e-19  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_007406  Nwi_0673  binding-protein dependent transport system inner membrane protein  30.73 
 
 
275 aa  95.5  8e-19  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0666321  normal  0.331074 
 
 
-
 
NC_008390  Bamb_1464  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
270 aa  95.5  8e-19  Burkholderia ambifaria AMMD  Bacteria  normal  0.0183453  n/a   
 
 
-
 
NC_008781  Pnap_2417  binding-protein-dependent transport systems inner membrane component  31.28 
 
 
300 aa  95.5  8e-19  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0833403  normal 
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  33.51 
 
 
285 aa  95.5  9e-19  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_007492  Pfl01_5412  binding-protein dependent transport system inner membrane protein  28.94 
 
 
260 aa  95.5  9e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.210037  hitchhiker  0.00191971 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
274 aa  95.1  1e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3818  binding-protein-dependent transport systems inner membrane component  31.67 
 
 
280 aa  95.5  1e-18  Conexibacter woesei DSM 14684  Bacteria  normal  0.615395  normal  0.42897 
 
 
-
 
NC_008463  PA14_19510  ABC transporter permease  33.48 
 
 
274 aa  95.1  1e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1556  binding-protein-dependent transporter inner membrane component  29.96 
 
 
301 aa  95.5  1e-18  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  34.3 
 
 
258 aa  95.1  1e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_010511  M446_3457  binding-protein-dependent transport systems inner membrane component  31.93 
 
 
251 aa  94.4  2e-18  Methylobacterium sp. 4-46  Bacteria  normal  0.693916  hitchhiker  0.00170631 
 
 
-
 
NC_010508  Bcenmc03_1539  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
270 aa  94.4  2e-18  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0890555  normal 
 
 
-
 
NC_008060  Bcen_1083  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
270 aa  94.4  2e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1563  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
270 aa  94.4  2e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0116  membrane protein  34.59 
 
 
281 aa  94  2e-18  Methylibium petroleiphilum PM1  Bacteria  normal  0.0935043  hitchhiker  0.000854026 
 
 
-
 
NC_007510  Bcep18194_A4705  nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein  30.16 
 
 
270 aa  94  3e-18  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3295  binding-protein dependent transport system inner membrane protein  31.97 
 
 
279 aa  93.2  4e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1453  alkanesulfonate transporter permease subunit  25.74 
 
 
263 aa  93.2  4e-18  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4074  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
281 aa  93.2  4e-18  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.265456 
 
 
-
 
NC_011894  Mnod_5516  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
262 aa  93.2  4e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1338  binding-protein-dependent transport systems inner membrane component  31 
 
 
260 aa  92.8  5e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.011116 
 
 
-
 
NC_009720  Xaut_3459  binding-protein-dependent transport systems inner membrane component  29.37 
 
 
283 aa  92.8  5e-18  Xanthobacter autotrophicus Py2  Bacteria  normal  0.703735  normal 
 
 
-
 
NC_012791  Vapar_2975  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
284 aa  92.8  5e-18  Variovorax paradoxus S110  Bacteria  normal  0.27836  n/a   
 
 
-
 
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