| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4522 |
|---|
| Symbol | |
|---|
| ID | 5672871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 5394769 |
|---|
| End bp | 5395758 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641243387 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001508803 |
|---|
| Protein GI | 158316295 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCCGA CGCCGGTGTC GACAACAGCC GGAGTGCAGG CCGCAGTGCC GGCCGGGCCG
CAGGGCGTCG GCGTGCCGGG CGGCGGCGGC GCGCAGGGCG GTGTGCTGGG CGGCCCCGTG
GCGGCCACCG TCACCGGCTC GGATGAGCAG TCGTCCACCA CCGCGGCCCG CAAGCCGCGC
CGCCCGATGG ACATCAAGCG GCTGATCGTC CTCATCTCGC GGGTGGTACT CCCGGTCGGG
GTGCTGGCAC TCTGGGAGAC CGCGAGCGGG GACCCCGCGA CCGAGTCGGG CGTGCTCATC
GACAGTTTCT ACGTCAGCAA GCCGTCCGAG ATCTGGTCGG CGCTGACCGG CTGGGTCGAG
GAGGGTGTGC TGCTGGACAG CATCCAGGCG ACCGTCATCG CGACGGTGTA CGGGTTCGCC
ATCGGCGCGG TGCTCGGCGT TCTGGTGGGC ATCGTGCTGG GCAGCAGCCC GATGCTCGGC
GAGATCTTCC AGCCGTTCAT CGTCGCGCTC AACGCGGTCC CGCGGCTGGC CCTGGTGCCG
CTTTTCATCC TGTGGTTCGG ATTCGGCCTG GGTTCCAAGG TGGCGCTGGT CAGCCTCATC
GTCTTCTTTC TCGTCTTCTA CAGCACCTAC GAAGGTGTGC GTGACGTCGA ACAGCGCCTT
ATCGACGTGC TGAAGGTGAT GAACGCGTCG AGGCTCACCG TGCAGCTGAA AGTTCGGATC
CCCTCGGCCG GGACCTGGAT CATCCAGGGC CTGCGGGTCT CGGTGCCCTA CGCGCTCGTC
GCGGCGGTCA CCGCCGAAAT CATCGGCGCC AACACCGGCA TCGGTTATCT GATCCAGCGG
TCGGCGGGTA ACTTCTACAC CGCCGGCGTC TTCGCGGGCA TCGCGGTTCT TGTGGTGGTC
TCCACCATCA TCAACGCGCT CGTGACGCTG CTGGAGAAGC GCCTGCTGCG GTGGAAGCCG
CGCAACCTGA CCAACGTCGG AGCACCATGA
|
|---|
| Protein sequence | MNPTPVSTTA GVQAAVPAGP QGVGVPGGGG AQGGVLGGPV AATVTGSDEQ SSTTAARKPR
RPMDIKRLIV LISRVVLPVG VLALWETASG DPATESGVLI DSFYVSKPSE IWSALTGWVE
EGVLLDSIQA TVIATVYGFA IGAVLGVLVG IVLGSSPMLG EIFQPFIVAL NAVPRLALVP
LFILWFGFGL GSKVALVSLI VFFLVFYSTY EGVRDVEQRL IDVLKVMNAS RLTVQLKVRI
PSAGTWIIQG LRVSVPYALV AAVTAEIIGA NTGIGYLIQR SAGNFYTAGV FAGIAVLVVV
STIINALVTL LEKRLLRWKP RNLTNVGAP
|
|---|
| |