More than 300 homologs were found in PanDaTox collection
for query gene BBta_5984 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_5984  putative ABC transporter (permease protein)  100 
 
 
255 aa  479  1e-134  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.27636 
 
 
-
 
NC_008786  Veis_0385  binding-protein-dependent transport systems inner membrane component  51.05 
 
 
259 aa  187  2e-46  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.925  normal  0.323719 
 
 
-
 
NC_012791  Vapar_0103  binding-protein-dependent transport systems inner membrane component  51.05 
 
 
256 aa  177  1e-43  Variovorax paradoxus S110  Bacteria  normal  0.631102  n/a   
 
 
-
 
NC_008254  Meso_3540  binding-protein-dependent transport systems inner membrane component  38.27 
 
 
258 aa  160  2e-38  Chelativorans sp. BNC1  Bacteria  normal  0.853389  n/a   
 
 
-
 
NC_012791  Vapar_0102  binding-protein-dependent transport systems inner membrane component  39.8 
 
 
263 aa  125  6e-28  Variovorax paradoxus S110  Bacteria  normal  0.922239  n/a   
 
 
-
 
NC_008786  Veis_0386  binding-protein-dependent transport systems inner membrane component  37.62 
 
 
266 aa  118  7.999999999999999e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.314921 
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
302 aa  118  9e-26  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_013093  Amir_5423  binding-protein-dependent transport systems inner membrane component  37.24 
 
 
298 aa  115  5e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3818  binding-protein-dependent transport systems inner membrane component  34.45 
 
 
280 aa  112  6e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.615395  normal  0.42897 
 
 
-
 
NC_009720  Xaut_1210  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
315 aa  110  2.0000000000000002e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  33.04 
 
 
272 aa  108  1e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_008254  Meso_3539  binding-protein-dependent transport systems inner membrane component  28.82 
 
 
253 aa  107  1e-22  Chelativorans sp. BNC1  Bacteria  normal  0.158821  n/a   
 
 
-
 
NC_013205  Aaci_2846  binding-protein-dependent transport systems inner membrane component  28.15 
 
 
260 aa  107  2e-22  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000143494  n/a   
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  29.52 
 
 
283 aa  107  2e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_007492  Pfl01_3295  binding-protein dependent transport system inner membrane protein  32.58 
 
 
279 aa  106  3e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  35.51 
 
 
286 aa  107  3e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_013421  Pecwa_0030  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
264 aa  106  4e-22  Pectobacterium wasabiae WPP163  Bacteria  normal  0.050552  n/a   
 
 
-
 
NC_008463  PA14_19570  ABC transporter permease  31.48 
 
 
262 aa  106  4e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1684  ABC transporter permease  31.94 
 
 
262 aa  106  5e-22  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0024  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
264 aa  105  6e-22  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_19510  ABC transporter permease  33.33 
 
 
274 aa  105  6e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2515  binding-protein dependent transport system inner membrane protein  30.99 
 
 
282 aa  105  8e-22  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.313862  normal 
 
 
-
 
NC_009720  Xaut_3459  binding-protein-dependent transport systems inner membrane component  36.63 
 
 
283 aa  105  9e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  0.703735  normal 
 
 
-
 
NC_009483  Gura_3884  binding-protein-dependent transport systems inner membrane component  27.35 
 
 
258 aa  104  1e-21  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_5349  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
271 aa  104  1e-21  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5438  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
271 aa  104  1e-21  Mycobacterium sp. KMS  Bacteria  normal  normal  0.586381 
 
 
-
 
NC_009077  Mjls_5728  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
271 aa  104  1e-21  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1679  ABC transporter permease  32.86 
 
 
274 aa  104  2e-21  Pseudomonas aeruginosa PA7  Bacteria  normal  0.451747  n/a   
 
 
-
 
NC_013595  Sros_1813  ABC transporter membrane protein  33.75 
 
 
256 aa  104  2e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  0.48548  normal  0.635137 
 
 
-
 
NC_009708  YpsIP31758_0355  putative ABC aliphatic sulfonates transporter, permease subunit  29.55 
 
 
264 aa  103  3e-21  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2304  binding-protein-dependent transport systems inner membrane component  26.99 
 
 
278 aa  103  3e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.37818 
 
 
-
 
NC_010465  YPK_0423  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
264 aa  103  3e-21  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
278 aa  102  4e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_009485  BBta_5985  putative ABC transporter (permease protein)  35.88 
 
 
255 aa  103  4e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.209656 
 
 
-
 
NC_011004  Rpal_2882  binding-protein-dependent transport systems inner membrane component  27.66 
 
 
268 aa  102  5e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.80309  n/a   
 
 
-
 
NC_002947  PP_0239  binding-protein-dependent transport systems inner membrane component  28.31 
 
 
265 aa  102  6e-21  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00756787 
 
 
-
 
NC_013159  Svir_34310  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.87 
 
 
256 aa  102  6e-21  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0981  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  32.3 
 
 
279 aa  102  6e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0254  binding-protein-dependent transport systems inner membrane component  28.31 
 
 
265 aa  102  6e-21  Pseudomonas putida F1  Bacteria  normal  0.293544  normal  0.0445843 
 
 
-
 
NC_010501  PputW619_4973  binding-protein-dependent transport systems inner membrane component  28.77 
 
 
265 aa  102  6e-21  Pseudomonas putida W619  Bacteria  normal  0.0722896  normal  0.022026 
 
 
-
 
NC_004578  PSPTO_2787  ABC transporter, permease protein  31.22 
 
 
282 aa  102  7e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0328614  n/a   
 
 
-
 
NC_013159  Svir_18130  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  32.91 
 
 
283 aa  102  7e-21  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  32 
 
 
255 aa  102  8e-21  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_011666  Msil_0768  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
286 aa  101  1e-20  Methylocella silvestris BL2  Bacteria  n/a    normal  0.113876 
 
 
-
 
NC_010322  PputGB1_0263  binding-protein-dependent transport systems inner membrane component  28.31 
 
 
265 aa  100  2e-20  Pseudomonas putida GB-1  Bacteria  normal  0.791848  normal 
 
 
-
 
NC_009972  Haur_2787  binding-protein-dependent transport systems inner membrane component  29.77 
 
 
272 aa  100  2e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.334714  n/a   
 
 
-
 
NC_010581  Bind_0676  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
279 aa  100  2e-20  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.30868 
 
 
-
 
NC_005945  BAS2712  sulfonate ABC transporter permease  28.78 
 
 
282 aa  100  3e-20  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  29.22 
 
 
264 aa  100  3e-20  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_007530  GBAA_2920  sulfonate ABC transporter permease protein  28.78 
 
 
282 aa  100  3e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1572  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
538 aa  100  3e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  30.93 
 
 
283 aa  100  3e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4371  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
250 aa  99.8  3e-20  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.249078 
 
 
-
 
NC_011757  Mchl_4847  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
250 aa  99.8  4e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0332  binding-protein-dependent transport systems inner membrane component  32.04 
 
 
279 aa  99.8  4e-20  Methylobacterium extorquens PA1  Bacteria  normal  0.692278  normal 
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  34.2 
 
 
285 aa  99.8  4e-20  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_013757  Gobs_2478  binding-protein-dependent transport systems inner membrane component  41.48 
 
 
285 aa  99.8  4e-20  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0464  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
273 aa  99.4  5e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3082  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
280 aa  99.4  5e-20  Arthrobacter sp. FB24  Bacteria  normal  0.0593827  n/a   
 
 
-
 
NC_013510  Tcur_4670  binding-protein-dependent transport systems inner membrane component  36.7 
 
 
259 aa  99.4  5e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
265 aa  99  7e-20  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  30.17 
 
 
290 aa  98.6  8e-20  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  30 
 
 
272 aa  97.8  1e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_009436  Ent638_1453  alkanesulfonate transporter permease subunit  28.37 
 
 
263 aa  98.2  1e-19  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3008  binding-protein-dependent transport systems inner membrane component  29 
 
 
280 aa  98.2  1e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1556  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
260 aa  98.2  1e-19  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00657173  hitchhiker  0.00236959 
 
 
-
 
NC_007952  Bxe_B2638  ABC sulfonate transporter, inner membrane subunit  30.22 
 
 
279 aa  97.8  1e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.0950643  hitchhiker  0.0000361652 
 
 
-
 
NC_010725  Mpop_4265  binding-protein-dependent transport systems inner membrane component  34.95 
 
 
250 aa  97.8  2e-19  Methylobacterium populi BJ001  Bacteria  normal  0.62736  normal 
 
 
-
 
NC_007777  Francci3_0250  binding-protein-dependent transport systems inner membrane component  28.7 
 
 
280 aa  97.4  2e-19  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5130  binding-protein-dependent transport systems inner membrane component  30.23 
 
 
272 aa  97.4  2e-19  Methylobacterium sp. 4-46  Bacteria  normal  0.612608  normal  0.0470724 
 
 
-
 
NC_013159  Svir_34320  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  31.85 
 
 
273 aa  97.4  2e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_4108  binding-protein-dependent transport systems inner membrane component  32 
 
 
283 aa  97.4  2e-19  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0411  binding-protein-dependent transport systems inner membrane component  31.75 
 
 
279 aa  96.7  3e-19  Methylobacterium populi BJ001  Bacteria  normal  0.760866  normal 
 
 
-
 
NC_008639  Cpha266_0145  binding-protein-dependent transport systems inner membrane component  29.61 
 
 
266 aa  96.7  3e-19  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3413  binding-protein-dependent transport systems inner membrane component  28.26 
 
 
271 aa  96.7  3e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0409101  normal  0.884011 
 
 
-
 
NC_013441  Gbro_3478  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
291 aa  96.3  4e-19  Gordonia bronchialis DSM 43247  Bacteria  normal  0.466071  n/a   
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  29.29 
 
 
273 aa  96.3  4e-19  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
288 aa  96.3  5e-19  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_012912  Dd1591_1673  binding-protein-dependent transport systems inner membrane component  29.84 
 
 
263 aa  95.9  6e-19  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  30.96 
 
 
273 aa  95.9  6e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
259 aa  95.9  6e-19  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  25.93 
 
 
254 aa  95.5  6e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_009664  Krad_4420  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
279 aa  95.5  8e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.25857  normal 
 
 
-
 
NC_010086  Bmul_4035  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
287 aa  95.1  9e-19  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0678072 
 
 
-
 
NC_011894  Mnod_4895  binding-protein-dependent transport systems inner membrane component  31.17 
 
 
251 aa  95.1  9e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  26.97 
 
 
281 aa  94.7  1e-18  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  29.89 
 
 
271 aa  94.7  1e-18  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_012880  Dd703_1642  binding-protein-dependent transport systems inner membrane component  29.23 
 
 
263 aa  94.7  1e-18  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  28.87 
 
 
273 aa  94.7  1e-18  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  28.87 
 
 
273 aa  94.7  1e-18  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_2657  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
269 aa  94  2e-18  Caulobacter sp. K31  Bacteria  normal  normal  0.363458 
 
 
-
 
NC_014150  Bmur_1575  binding-protein-dependent transport systems inner membrane component  26.94 
 
 
266 aa  94  2e-18  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_5005  binding-protein-dependent transport systems inner membrane component  29.28 
 
 
289 aa  94.4  2e-18  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0210  binding-protein dependent transport system inner membrane protein  31.49 
 
 
532 aa  93.6  3e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0149  binding-protein-dependent transport systems inner membrane component  31.96 
 
 
532 aa  93.6  3e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3457  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
251 aa  93.2  4e-18  Methylobacterium sp. 4-46  Bacteria  normal  0.693916  hitchhiker  0.00170631 
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  31.53 
 
 
254 aa  93.2  4e-18  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_013595  Sros_1818  ABC transporter, permease protein  28.57 
 
 
263 aa  93.2  4e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.493092 
 
 
-
 
NC_007492  Pfl01_5412  binding-protein dependent transport system inner membrane protein  27.78 
 
 
260 aa  92.4  6e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.210037  hitchhiker  0.00191971 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  30.38 
 
 
269 aa  92.4  6e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
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