| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1572 |
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| Symbol | |
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| ID | 6409229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1680884 |
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| End bp | 1682500 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711464 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001990579 |
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| Protein GI | 192289974 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCG ACGTCGTAGC CAGCGGAGAC TACCCACCGC GCGGAGCGGC CGTTGCAGGA
TTCCGCACGC TGCCACGGTT CGGTGTGCCG GCCTGGCTGC GGTCCTCGGC GCTGCTGGGG
CTGGTGGTGC CGGTCGCCTT GTTGGCGCTG TGGAGCGTCG CAGCGGAGCG GCACTGGATG
TCGTCGCAGG TGCTGCCGAC TCCGGCTTTG GTGTGGCAGA CAGCGGGTGA ACTGCTTGCG
GACAATCTGC TGTCGAACCT CGCGATCAGT TTGCAGCGTC TGCTGTTCGG CTTCACGCTC
GCGGCTTTGG CCGGCGGCTT TCTCGGCGGC GCGATGGGGC TCAGTCGGCG TGTGGAGGCG
GCGATCTATC CGACCTTCAT CGCGCTGGTG CAGGTGCCGA CGCTTGCCTG GATTCCCTTC
CTGATGATGG TGCTCGGCCT CGGCGAGGCG CTGAAGGTCG TCGTCATCAT CAAGGCGGTG
GTCACCCCGG TGGTGATCTA CACCCATGTC GGCGTCCGCG ATGTCGATCC GAAGCTGCTC
GAGGCCACAC GCATTCTACG CCTCGGTTTC TTTCGACGTC TGGGCAGCGT GATCCTGCCG
GCAGCGCTGC CGGCGTTTCT CACCGGGCTG AGGCTCGGAC TGGCGCAGGG CTGGACCTCA
CTGGTCGCCG TTGAGCTGCT GGCGTCCTCG GAAGGCATCG GCTTCCTGAT GGTGTGGGGC
CGGCAGCTGT TCCAACTCGA CGTGGTGTTC GTCTGCATCC TGGTGATCGG CATCGTCGGT
CTGGTGATGG ACCGCGGGCT CAATGTCGTC GATCGCGCCG CAGTGCGCTG GCCGCGTCCG
GCCTTGGCGG AGCACCGCAC CGCGCGCGGC GGATATCGTC TGCTGTCATG GCTCTTCCCG
GCGGGACTGC TGGCGGCATG GGCCGCCGCG AGCGCTTCGG GTGCTATCAG TCCGACAATG
TTGCCATCGC CGGCGGCGGT GCTGTCGGTG CTCGGCCACG GTCTCGCCGA TGGATCGTTC
GAAACCGCGA TGGGCCTCAG CCTGCAACGC GCGTTCATCG GCCTCGCGCT CGGTGCCGGC
AGTGGCTTTG CGGTGGGCTT GGCGATGGGT CTGAACCGCC CACTCGACCG CTTGTTCAAT
GGCACGCTCG CGGCGCTACG GCTGGTCGCG ATTTTCGCGT GGATTCCGTT GCTGACCGCC
TGGGTCGGGC TGGGCGAAGC GTCGAAGATC ACTTTCGTGG CGATCGCCAG CTTCTTTCCG
ATGCAACTGG CGGCCTATCG CGGCGTCGCG ACGCTGTCCC CGCATCTGAT CGAAGCGTCG
TGGACGCTGC GGCTCGGCGG AAGCGACCGG CTGCGCTGCC TGGTGCTGCC CGGCATCGCT
CCTTCGGTGT TTGCCGGACT GCGGCTGGCG CTGCTGCAAT GCTGGATCGG CACGATGGGC
GCCGAGTACT TCATGCCCTC TGGGGGAGGC ATCGGCAGCC TGATGATCGG CGCCCAGCAG
ATGTTCCGGA CCGACGTGGT GCTTGCTGCG ATGGTGATGA TCGGCGTGGT CGCCGCGCTG
CTCAACGCGA TCGGCAGCAG GATCGAAGCG CGCGCAACCC GTTGGAGATC GGCATGA
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| Protein sequence | MSSDVVASGD YPPRGAAVAG FRTLPRFGVP AWLRSSALLG LVVPVALLAL WSVAAERHWM
SSQVLPTPAL VWQTAGELLA DNLLSNLAIS LQRLLFGFTL AALAGGFLGG AMGLSRRVEA
AIYPTFIALV QVPTLAWIPF LMMVLGLGEA LKVVVIIKAV VTPVVIYTHV GVRDVDPKLL
EATRILRLGF FRRLGSVILP AALPAFLTGL RLGLAQGWTS LVAVELLASS EGIGFLMVWG
RQLFQLDVVF VCILVIGIVG LVMDRGLNVV DRAAVRWPRP ALAEHRTARG GYRLLSWLFP
AGLLAAWAAA SASGAISPTM LPSPAAVLSV LGHGLADGSF ETAMGLSLQR AFIGLALGAG
SGFAVGLAMG LNRPLDRLFN GTLAALRLVA IFAWIPLLTA WVGLGEASKI TFVAIASFFP
MQLAAYRGVA TLSPHLIEAS WTLRLGGSDR LRCLVLPGIA PSVFAGLRLA LLQCWIGTMG
AEYFMPSGGG IGSLMIGAQQ MFRTDVVLAA MVMIGVVAAL LNAIGSRIEA RATRWRSA
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