| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0103 |
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| Symbol | |
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| ID | 7971639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 102349 |
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| End bp | 103119 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790706 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002942032 |
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| Protein GI | 239813122 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.631102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAC ACCGCCTCTT GCGCTGGCTG CGGCCCTGGG TCTTTCCGGC CCTGCTGGTC
GGCGCCTTCG AGTGGTATGC GCGGCGCGCA GCCGCCTTGG GCAGCGATGC GCTCGCCCCG
CCGAGCGCGG CGGCCCGGGC CTTCATGGGC GCGGCGCTCG ATGGCTCGCT GTGGCAGGCG
ACGGGCTTCA CGCTGGGCAC GGCCGCGCTC GGCCTGCTGC TGGGCGCGGT GCTCGGCATT
GCGCTGGGCC TGGTGCTCGG GCTCTCGCGC CGCGCGGCGC AGCTCGGCTC GCTTTCCATC
GAGGTGCTGC GGCCCGTGCC CTCGGTGGCG CTGATTCCGC TCGCGATGCT GACCTTCGGC
TTCGGCGTGC GCATGGAGCT GGCCATCGTC GCCTTTGCCA CCTTCTGGCC ACTGCTGGTG
CTGGTGCAGT CGGCGGTGCA GCAGATCGAG CCGCGGCTGC TCGAGGTGAG CCGCGTGCTG
GGGCTCTCGG CGCGCGAGCG TGCCTTCAAG ATCGTGCTGC CGGCCATCGC GGCGCGCCTG
TTCGTGGCGC TGCGCCTCGG CGTGGCGGTG GCGCTGGTGG TGGCCGTCAC GGTGGAGATC
GCGGCCAATC CCAACGGCAT GGGCTACGCG ATGATGATCG CGCAGCAGAG CTTCGACCCC
GCGCTGATGC TTGCGTGGCT GGGCTGGATC GGCGTGGTGG GCTTTGCGGT CAATGCGGGC
ATGGTGCTGC TGCAGCGCGT GGTCGCTCGG CGCATGGGGG TGCTGCCATG A
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| Protein sequence | MTEHRLLRWL RPWVFPALLV GAFEWYARRA AALGSDALAP PSAAARAFMG AALDGSLWQA
TGFTLGTAAL GLLLGAVLGI ALGLVLGLSR RAAQLGSLSI EVLRPVPSVA LIPLAMLTFG
FGVRMELAIV AFATFWPLLV LVQSAVQQIE PRLLEVSRVL GLSARERAFK IVLPAIAARL
FVALRLGVAV ALVVAVTVEI AANPNGMGYA MMIAQQSFDP ALMLAWLGWI GVVGFAVNAG
MVLLQRVVAR RMGVLP
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