Gene Pden_4108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4108 
Symbol 
ID4582659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1261072 
End bp1261923 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID639771417 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_917870 
Protein GI119386815 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA TGACGCGCAG CCACGGCGGG ACGCTCCTCG ACCCCGCGCC CGGCAGGACC 
GGGAAAACCA CCACCTCCAA TCGCCTGGCG CCGGGAAAGC TGCCGCGCGG ATTGCAACTG
GCCGGGCCCG TCCTGCTGGT CGTCCTGTGG GAGGCGGCGG CGCGGCTGGG CTATCTTTCG
CCGCATACGC TCGCCGCGCC CTCGACCGCC ATCGCGACGG GGTTCGAGAT GTTCGCCGAC
GGCACCCTGT TGCCGCATCT GGCGGCATCG GCAGGGCGGG CCTATGCGGG GCTGTTCCTT
GGCGTTCTGG CGGGGGTCGT GCTGGCCCTT GCCTCGGGGC TGACCATGAC CGGCGAGGCG
CTGATCGACG GGCTGGTCCA GATCAAGCGG GCGATTCCCA CCCTGGCGCT GATCCCGCTG
GTGATCTTGT GGCTGGGGAT CGGCGAGGCG ATGAAGATCT TCATCATCTT CACCGCCGTG
CTGGTGCCGG TCTATGTCAA CACCCATGCG GCACTGCGCG GCATCGATAT CGGCCATGTC
GAACTGGCCC GAACCCTGGG CCTGACCCGG TCCGAGTTCA TCCGCAACGT CGCGCTGCCG
GGGGCGCTGC CGGGCTTTTT CGTCTCGCTG CGTCTGGCGG TCACCCTGTG CTGGACCTCG
CTCGTGGTGC TGGAACTGAT CAACACCCAG ACGGGCATCG GCTATCTGAT GAACCGTGCC
CGCGACTGGG GCCAGACCGA CATCATCGTC GTGGGCATCT TGATCTATGC CGTCCTCGGC
CTGCTTTCCG ACGCGGCGGT GCGCATGGTC GAGGCCCGCG CGCTGAGCTA TCGCAGGTCT
ATCGGCTCAT GA
 
Protein sequence
MNDMTRSHGG TLLDPAPGRT GKTTTSNRLA PGKLPRGLQL AGPVLLVVLW EAAARLGYLS 
PHTLAAPSTA IATGFEMFAD GTLLPHLAAS AGRAYAGLFL GVLAGVVLAL ASGLTMTGEA
LIDGLVQIKR AIPTLALIPL VILWLGIGEA MKIFIIFTAV LVPVYVNTHA ALRGIDIGHV
ELARTLGLTR SEFIRNVALP GALPGFFVSL RLAVTLCWTS LVVLELINTQ TGIGYLMNRA
RDWGQTDIIV VGILIYAVLG LLSDAAVRMV EARALSYRRS IGS