Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4108 |
Symbol | |
ID | 4582659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1261072 |
End bp | 1261923 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639771417 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_917870 |
Protein GI | 119386815 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA TGACGCGCAG CCACGGCGGG ACGCTCCTCG ACCCCGCGCC CGGCAGGACC GGGAAAACCA CCACCTCCAA TCGCCTGGCG CCGGGAAAGC TGCCGCGCGG ATTGCAACTG GCCGGGCCCG TCCTGCTGGT CGTCCTGTGG GAGGCGGCGG CGCGGCTGGG CTATCTTTCG CCGCATACGC TCGCCGCGCC CTCGACCGCC ATCGCGACGG GGTTCGAGAT GTTCGCCGAC GGCACCCTGT TGCCGCATCT GGCGGCATCG GCAGGGCGGG CCTATGCGGG GCTGTTCCTT GGCGTTCTGG CGGGGGTCGT GCTGGCCCTT GCCTCGGGGC TGACCATGAC CGGCGAGGCG CTGATCGACG GGCTGGTCCA GATCAAGCGG GCGATTCCCA CCCTGGCGCT GATCCCGCTG GTGATCTTGT GGCTGGGGAT CGGCGAGGCG ATGAAGATCT TCATCATCTT CACCGCCGTG CTGGTGCCGG TCTATGTCAA CACCCATGCG GCACTGCGCG GCATCGATAT CGGCCATGTC GAACTGGCCC GAACCCTGGG CCTGACCCGG TCCGAGTTCA TCCGCAACGT CGCGCTGCCG GGGGCGCTGC CGGGCTTTTT CGTCTCGCTG CGTCTGGCGG TCACCCTGTG CTGGACCTCG CTCGTGGTGC TGGAACTGAT CAACACCCAG ACGGGCATCG GCTATCTGAT GAACCGTGCC CGCGACTGGG GCCAGACCGA CATCATCGTC GTGGGCATCT TGATCTATGC CGTCCTCGGC CTGCTTTCCG ACGCGGCGGT GCGCATGGTC GAGGCCCGCG CGCTGAGCTA TCGCAGGTCT ATCGGCTCAT GA
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Protein sequence | MNDMTRSHGG TLLDPAPGRT GKTTTSNRLA PGKLPRGLQL AGPVLLVVLW EAAARLGYLS PHTLAAPSTA IATGFEMFAD GTLLPHLAAS AGRAYAGLFL GVLAGVVLAL ASGLTMTGEA LIDGLVQIKR AIPTLALIPL VILWLGIGEA MKIFIIFTAV LVPVYVNTHA ALRGIDIGHV ELARTLGLTR SEFIRNVALP GALPGFFVSL RLAVTLCWTS LVVLELINTQ TGIGYLMNRA RDWGQTDIIV VGILIYAVLG LLSDAAVRMV EARALSYRRS IGS
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