Gene Pden_5005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5005 
Symbol 
ID4583566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp515671 
End bp516540 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content68% 
IMG OID639772308 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_918761 
Protein GI119387727 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA CCGAGATCGA CCGCAGCTAT GCCGCACTGC GCAAGGATCG CCCGGCCGAG 
CCGGCGGATG CGCTGGTGCG GCTGACCCCG GCCACGGCCC GCGGGCGGCA GGTGCCGCGC
TGGCTGCGCC GGGGCATCGG CCCGGTGGCG CTGGTGCTGG TCTGGCATCT CGCCTCGATC
ACCGGCGTCC TGCCCGCCGA GGTGCTGGCG GGGCCTGCCA CCGTGCTTTC CAGCGCCGCG
AAGCTGATCC AGACCGGCGA GTTGCAAGAG GCGGTCGTCG TATCGATGCA GCGCGCGATG
AGCGGGCTGC TGATCGGCGG CACCATCGGC GTCGCGCTTG CCATCCTGTC CGGCCTGACC
CGGCTGGGCG AGGATCTGGT CGACGCGCCC ATGCAGATGC TGCGCACCGT GCCGAACGTG
GCGCTGATCC CGCTGCTGAT CATCTGGTTC GGCATCGGCG AGGCGCCGAA AATCGCGCTG
ATCGCGCTTG CGACGGCCTT TCCGTTGTAT CTCAACGTCT ATGCCGGCAT CCGGGGCGTG
GACCAGTCCC TGATCGAGGC CGGGCGGACG CTGGGCCTTG GCCGTGCCGG GCTGGTGCGC
CATGTCATCC TGCCCGGTGC GCTGCCCAAT GCCCTGGTCG GCCTGCGCTA TTCGCTGGGC
ATCGCCTGGC TGGCGCTTGT CTTTGGCGAG CAGATCAACG CCACCGCCGG CGTGGGCTAT
CTGATGGCCA ATGCGCGCGA ATTCTTCCAG ACCGACGTGA TCGTCGTCTG CCTTGTCGTC
TATGCCCTGC TCGGCCTTGC CGTCGATCTG GTGGTGCGCA GCTTGGAAAG GATCTTCCTG
TCATGGCGAC CCAACTTCAC CGGAGCCTGA
 
Protein sequence
MSITEIDRSY AALRKDRPAE PADALVRLTP ATARGRQVPR WLRRGIGPVA LVLVWHLASI 
TGVLPAEVLA GPATVLSSAA KLIQTGELQE AVVVSMQRAM SGLLIGGTIG VALAILSGLT
RLGEDLVDAP MQMLRTVPNV ALIPLLIIWF GIGEAPKIAL IALATAFPLY LNVYAGIRGV
DQSLIEAGRT LGLGRAGLVR HVILPGALPN ALVGLRYSLG IAWLALVFGE QINATAGVGY
LMANAREFFQ TDVIVVCLVV YALLGLAVDL VVRSLERIFL SWRPNFTGA