Gene Veis_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0385 
Symbol 
ID4692201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp433129 
End bp433908 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content69% 
IMG OID639848166 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_995191 
Protein GI121607384 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.323719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA TGGCACAGGG CCGCTTGTTG CGCTGGCTGC GGCCGTGGGT GTTTCCTGCG 
CTGCTGGCCG CTGCCTTCGA GTGGTACGCG CGGCGCGCAG CCGCGCTGGG CAGCGATGCA
CTTGCGCCGC CGAGCGCTGC GACCAGGGCT TTGGTCGGCG CGGCGCTGGA CGGCTCGCTC
TGGCACGCCA CAGGCTTTAC GCTCGGCACG GCGGCGCTCG GCCTGCTGCT GGGCACGGCG
CTCGGGCTGG CGCTCGGACT GGTGCTCGGG ATCTCGCGCC GCGCGGCGCA ACTGGGGTTT
TTGTCGATCG AGGTGCTGCG GCCCGTGCCT TGCGTTGCGC TGATTCCGCT GTCGATGCTG
ACCTTCGGCT TTGGCGTGCG CATGGAACTG GGCATCGTCG CCTTCGCCAC CTTTTGGCCG
CTGCTGGTGC TGGTGCAGTC GGCGGTGCAG CAGATCGAGC CCCGGCTGCT CGAAGTCAGC
CGCGTGCTGG GTCTGTCGGC ACGCGAGCGG ACTTTCAAGA TCGTGCTGCC GGCCATCGTG
CCGCGCCTGT TTGTCGCGTT GCGGCTTGGC GTGGCGCTGG CGCTGGTGGT GGCCGTGACG
GTGGAGATTG CGGCCAACCC CTACGGCATG GGCTACGCGA TGATGATTGC GCAGCAGAGT
TTCGAGCCTG CGCTGATGCT CGCGTGGCTC GGCTGGATCG GCGTGGTGGG CTTTGCAGTC
AATGCCGGCA TGGTGCTTTT GCAGCGGCTG GTGGCGCGGC GCATGGGGGC GCTGTCATGA
 
Protein sequence
MTEMAQGRLL RWLRPWVFPA LLAAAFEWYA RRAAALGSDA LAPPSAATRA LVGAALDGSL 
WHATGFTLGT AALGLLLGTA LGLALGLVLG ISRRAAQLGF LSIEVLRPVP CVALIPLSML
TFGFGVRMEL GIVAFATFWP LLVLVQSAVQ QIEPRLLEVS RVLGLSARER TFKIVLPAIV
PRLFVALRLG VALALVVAVT VEIAANPYGM GYAMMIAQQS FEPALMLAWL GWIGVVGFAV
NAGMVLLQRL VARRMGALS