More than 300 homologs were found in PanDaTox collection
for query gene Veis_0386 on replicon NC_008786
Organism: Verminephrobacter eiseniae EF01-2



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008786  Veis_0386  binding-protein-dependent transport systems inner membrane component  100 
 
 
266 aa  508  1e-143  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.314921 
 
 
-
 
NC_012791  Vapar_0102  binding-protein-dependent transport systems inner membrane component  84.03 
 
 
263 aa  395  1e-109  Variovorax paradoxus S110  Bacteria  normal  0.922239  n/a   
 
 
-
 
NC_009485  BBta_5985  putative ABC transporter (permease protein)  53.25 
 
 
255 aa  238  5.999999999999999e-62  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.209656 
 
 
-
 
NC_008254  Meso_3540  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
258 aa  142  6e-33  Chelativorans sp. BNC1  Bacteria  normal  0.853389  n/a   
 
 
-
 
NC_013159  Svir_34320  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.47 
 
 
273 aa  133  3e-30  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  38.54 
 
 
285 aa  130  3e-29  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_010505  Mrad2831_4568  binding-protein-dependent transport systems inner membrane component  37.9 
 
 
286 aa  127  1.0000000000000001e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5422  binding-protein-dependent transport systems inner membrane component  34.24 
 
 
269 aa  127  2.0000000000000002e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  33.47 
 
 
290 aa  127  2.0000000000000002e-28  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
258 aa  125  8.000000000000001e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5729  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
263 aa  124  2e-27  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5350  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
263 aa  124  2e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5439  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
263 aa  124  2e-27  Mycobacterium sp. KMS  Bacteria  normal  normal  0.56019 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
274 aa  122  4e-27  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
281 aa  122  6e-27  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_011757  Mchl_1261  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
293 aa  120  1.9999999999999998e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.113651  normal 
 
 
-
 
NC_013595  Sros_1818  ABC transporter, permease protein  32.46 
 
 
263 aa  119  4.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.493092 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
283 aa  117  1.9999999999999998e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS2712  sulfonate ABC transporter permease  30.38 
 
 
282 aa  117  1.9999999999999998e-25  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5984  putative ABC transporter (permease protein)  38.54 
 
 
255 aa  117  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.27636 
 
 
-
 
NC_007530  GBAA_2920  sulfonate ABC transporter permease protein  30.38 
 
 
282 aa  117  1.9999999999999998e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3081  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
257 aa  116  3e-25  Arthrobacter sp. FB24  Bacteria  normal  0.0826963  n/a   
 
 
-
 
NC_007492  Pfl01_5412  binding-protein dependent transport system inner membrane protein  33.06 
 
 
260 aa  116  5e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.210037  hitchhiker  0.00191971 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  31.13 
 
 
273 aa  115  6.9999999999999995e-25  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_007778  RPB_2837  binding-protein dependent transport system inner membrane protein  38.65 
 
 
266 aa  115  6.9999999999999995e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.115716  normal 
 
 
-
 
NC_012850  Rleg_2304  binding-protein-dependent transport systems inner membrane component  31.78 
 
 
278 aa  115  6.9999999999999995e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.37818 
 
 
-
 
NC_009485  BBta_2535  putative taurine ABC transporter, permease protein  35.06 
 
 
282 aa  114  1.0000000000000001e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.254862  normal 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  34.51 
 
 
278 aa  114  1.0000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
255 aa  114  1.0000000000000001e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
283 aa  114  2.0000000000000002e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
273 aa  114  2.0000000000000002e-24  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
273 aa  114  2.0000000000000002e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0981  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  30.93 
 
 
279 aa  114  2.0000000000000002e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2953  binding-protein-dependent transport systems inner membrane component  39.13 
 
 
294 aa  114  2.0000000000000002e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  34.23 
 
 
272 aa  114  2.0000000000000002e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_013521  Sked_16930  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  35.87 
 
 
322 aa  114  2.0000000000000002e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.327  normal  0.410158 
 
 
-
 
NC_002947  PP_0239  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
265 aa  113  3e-24  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00756787 
 
 
-
 
NC_011832  Mpal_1145  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
279 aa  113  3e-24  Methanosphaerula palustris E1-9c  Archaea  normal  0.208956  normal 
 
 
-
 
NC_010501  PputW619_4973  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
265 aa  113  3e-24  Pseudomonas putida W619  Bacteria  normal  0.0722896  normal  0.022026 
 
 
-
 
NC_008463  PA14_19570  ABC transporter permease  33.2 
 
 
262 aa  112  4.0000000000000004e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1673  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
263 aa  112  5e-24  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0254  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
265 aa  112  5e-24  Pseudomonas putida F1  Bacteria  normal  0.293544  normal  0.0445843 
 
 
-
 
NC_013205  Aaci_2846  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
260 aa  112  5e-24  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000143494  n/a   
 
 
-
 
NC_008786  Veis_3788  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
276 aa  112  5e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.374556  normal 
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  30.64 
 
 
255 aa  112  6e-24  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_008254  Meso_3539  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
253 aa  112  7.000000000000001e-24  Chelativorans sp. BNC1  Bacteria  normal  0.158821  n/a   
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
269 aa  112  8.000000000000001e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  33.19 
 
 
274 aa  112  8.000000000000001e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
265 aa  111  9e-24  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2677  putative ABC transporter, permease protein  34.13 
 
 
255 aa  112  9e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.58951 
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
269 aa  111  1.0000000000000001e-23  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_4937  binding-protein-dependent transport systems inner membrane component  33.74 
 
 
287 aa  111  1.0000000000000001e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0773955  normal 
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
302 aa  111  1.0000000000000001e-23  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_013595  Sros_1812  ABC transporter, permease protein  31.03 
 
 
257 aa  111  1.0000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.554956  normal  0.627316 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  30.45 
 
 
273 aa  111  1.0000000000000001e-23  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_008541  Arth_3035  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
298 aa  111  1.0000000000000001e-23  Arthrobacter sp. FB24  Bacteria  normal  0.30367  n/a   
 
 
-
 
NC_010322  PputGB1_0263  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
265 aa  111  1.0000000000000001e-23  Pseudomonas putida GB-1  Bacteria  normal  0.791848  normal 
 
 
-
 
NC_007333  Tfu_1692  putative ABC transporter membrane protein  32.96 
 
 
281 aa  110  2.0000000000000002e-23  Thermobifida fusca YX  Bacteria  hitchhiker  0.00465779  n/a   
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  32.82 
 
 
269 aa  110  2.0000000000000002e-23  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1684  ABC transporter permease  33.47 
 
 
262 aa  110  2.0000000000000002e-23  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3082  binding-protein-dependent transport systems inner membrane component  31.76 
 
 
280 aa  110  2.0000000000000002e-23  Arthrobacter sp. FB24  Bacteria  normal  0.0593827  n/a   
 
 
-
 
NC_007347  Reut_A1975  binding-protein dependent transport system inner membrane protein  35.54 
 
 
267 aa  110  3e-23  Ralstonia eutropha JMP134  Bacteria  normal  0.59364  n/a   
 
 
-
 
NC_009485  BBta_7247  ABC transporter permease  36.18 
 
 
286 aa  110  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  decreased coverage  0.00669088  normal  0.643564 
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  30.24 
 
 
273 aa  110  3e-23  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  30.24 
 
 
273 aa  110  3e-23  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_19510  ABC transporter permease  31 
 
 
274 aa  110  3e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_7235  binding-protein-dependent transport systems inner membrane component  33.89 
 
 
285 aa  109  4.0000000000000004e-23  Burkholderia phymatum STM815  Bacteria  normal  0.266674  normal 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  33.2 
 
 
271 aa  109  4.0000000000000004e-23  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_013223  Dret_1646  binding-protein-dependent transport systems inner membrane component  38.42 
 
 
259 aa  109  4.0000000000000004e-23  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0286  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
261 aa  109  4.0000000000000004e-23  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.122201  hitchhiker  0.000248355 
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  31.16 
 
 
288 aa  108  7.000000000000001e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  33.74 
 
 
264 aa  108  9.000000000000001e-23  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_011757  Mchl_3715  binding-protein-dependent transport systems inner membrane component  32.78 
 
 
282 aa  108  1e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0101223 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  32.78 
 
 
277 aa  108  1e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_010682  Rpic_1216  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
270 aa  108  1e-22  Ralstonia pickettii 12J  Bacteria  normal  normal  0.150226 
 
 
-
 
NC_007908  Rfer_1776  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
294 aa  108  1e-22  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1679  ABC transporter permease  30.57 
 
 
274 aa  108  1e-22  Pseudomonas aeruginosa PA7  Bacteria  normal  0.451747  n/a   
 
 
-
 
NC_012880  Dd703_1642  binding-protein-dependent transport systems inner membrane component  29.58 
 
 
263 aa  108  1e-22  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3406  binding-protein-dependent transport systems inner membrane component  32.78 
 
 
286 aa  108  1e-22  Methylobacterium extorquens PA1  Bacteria  normal  0.316546  normal 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  32.77 
 
 
260 aa  107  2e-22  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_014150  Bmur_1575  binding-protein-dependent transport systems inner membrane component  27.39 
 
 
266 aa  107  2e-22  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  31.75 
 
 
269 aa  107  2e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_007952  Bxe_B2638  ABC sulfonate transporter, inner membrane subunit  30.13 
 
 
279 aa  107  2e-22  Burkholderia xenovorans LB400  Bacteria  normal  0.0950643  hitchhiker  0.0000361652 
 
 
-
 
NC_007953  Bxe_C0085  taurine ABC transporter inner membrane protein  33.33 
 
 
283 aa  107  2e-22  Burkholderia xenovorans LB400  Bacteria  normal  0.664827  normal  0.135193 
 
 
-
 
NC_009972  Haur_2787  binding-protein-dependent transport systems inner membrane component  31.67 
 
 
272 aa  107  2e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.334714  n/a   
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  30.58 
 
 
279 aa  106  3e-22  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_004311  BRA0467  taurine ABC transporter, permease protein, putative  30.3 
 
 
272 aa  106  3e-22  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0406  putative taurine ABC transporter, permease protein  30.3 
 
 
272 aa  106  3e-22  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1911  binding-protein-dependent transport systems inner membrane component  31.92 
 
 
282 aa  106  3e-22  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  32.33 
 
 
286 aa  106  3e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_013510  Tcur_1385  binding-protein-dependent transport systems inner membrane component  32.65 
 
 
284 aa  106  4e-22  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0616622  n/a   
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  30.42 
 
 
272 aa  106  4e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_008825  Mpe_A0116  membrane protein  34.16 
 
 
281 aa  106  4e-22  Methylibium petroleiphilum PM1  Bacteria  normal  0.0935043  hitchhiker  0.000854026 
 
 
-
 
NC_010551  BamMC406_1485  binding-protein-dependent transport systems inner membrane component  32.92 
 
 
270 aa  106  5e-22  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_2975  binding-protein-dependent transport systems inner membrane component  30.89 
 
 
284 aa  106  5e-22  Variovorax paradoxus S110  Bacteria  normal  0.27836  n/a   
 
 
-
 
NC_012917  PC1_0149  binding-protein-dependent transport systems inner membrane component  32.83 
 
 
532 aa  105  5e-22  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4214  binding-protein-dependent transport systems inner membrane component  30.23 
 
 
281 aa  105  5e-22  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1372  binding-protein-dependent transport systems inner membrane component  34.71 
 
 
268 aa  105  5e-22  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  30.35 
 
 
273 aa  105  6e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_009668  Oant_3592  binding-protein-dependent transport systems inner membrane component  30.3 
 
 
273 aa  105  7e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>