More than 300 homologs were found in PanDaTox collection
for query gene RPB_1482 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_1482  binding-protein dependent transport system inner membrane protein  100 
 
 
253 aa  491  9.999999999999999e-139  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6360  putative sulfonate ABC transporter, permease protein  38.96 
 
 
267 aa  177  2e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.821284  normal 
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  40.87 
 
 
252 aa  173  1.9999999999999998e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_007974  Rmet_4332  ABC transporter permease  39.67 
 
 
298 aa  169  3e-41  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3818  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
280 aa  155  4e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.615395  normal  0.42897 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  34.4 
 
 
271 aa  151  1e-35  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
277 aa  147  2.0000000000000003e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  33.73 
 
 
273 aa  143  2e-33  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
277 aa  140  9.999999999999999e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
288 aa  140  1.9999999999999998e-32  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
273 aa  140  3e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
273 aa  140  3e-32  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  34.35 
 
 
273 aa  139  3e-32  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  32.8 
 
 
277 aa  140  3e-32  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
283 aa  139  6e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
274 aa  137  1e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0423  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
264 aa  137  2e-31  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0355  putative ABC aliphatic sulfonates transporter, permease subunit  37.5 
 
 
264 aa  137  2e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1210  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
315 aa  136  3.0000000000000003e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1642  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
263 aa  135  7.000000000000001e-31  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
273 aa  134  9.999999999999999e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  29.92 
 
 
283 aa  133  3e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_009972  Haur_2787  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
272 aa  132  6e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.334714  n/a   
 
 
-
 
NC_010622  Bphy_1648  binding-protein-dependent transport systems inner membrane component  38.57 
 
 
283 aa  132  6e-30  Burkholderia phymatum STM815  Bacteria  normal  0.189471  normal  0.0804385 
 
 
-
 
NC_012912  Dd1591_1673  binding-protein-dependent transport systems inner membrane component  35.22 
 
 
263 aa  132  6.999999999999999e-30  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  32.68 
 
 
269 aa  132  6.999999999999999e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_011658  BCAH187_A3058  taurine ABC transporter, permease protein  34.38 
 
 
274 aa  131  9e-30  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
302 aa  131  9e-30  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_010501  PputW619_4973  binding-protein-dependent transport systems inner membrane component  35.22 
 
 
265 aa  131  1.0000000000000001e-29  Pseudomonas putida W619  Bacteria  normal  0.0722896  normal  0.022026 
 
 
-
 
NC_002947  PP_0239  binding-protein-dependent transport systems inner membrane component  34.82 
 
 
265 aa  130  2.0000000000000002e-29  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00756787 
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  35.43 
 
 
264 aa  130  2.0000000000000002e-29  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_013517  Sterm_0483  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
275 aa  129  3e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0254  binding-protein-dependent transport systems inner membrane component  34.41 
 
 
265 aa  129  3e-29  Pseudomonas putida F1  Bacteria  normal  0.293544  normal  0.0445843 
 
 
-
 
NC_010510  Mrad2831_6162  binding-protein-dependent transport systems inner membrane component  35.18 
 
 
262 aa  129  3e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.577279 
 
 
-
 
NC_012850  Rleg_2304  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
278 aa  129  3e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.37818 
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
269 aa  129  4.0000000000000003e-29  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
269 aa  129  4.0000000000000003e-29  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  35.04 
 
 
269 aa  129  4.0000000000000003e-29  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2226  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
259 aa  129  4.0000000000000003e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00307443  n/a   
 
 
-
 
NC_006274  BCZK2748  sulfonate/taurine ABC transporter permease  35.44 
 
 
274 aa  129  6e-29  Bacillus cereus E33L  Bacteria  normal  0.947189  n/a   
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
281 aa  129  6e-29  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
259 aa  129  6e-29  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  30.04 
 
 
272 aa  128  9.000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_003909  BCE_3060  taurine ABC transporter, permease protein  35.29 
 
 
274 aa  127  1.0000000000000001e-28  Bacillus cereus ATCC 10987  Bacteria  normal  0.0244271  n/a   
 
 
-
 
NC_010322  PputGB1_0263  binding-protein-dependent transport systems inner membrane component  34.41 
 
 
265 aa  128  1.0000000000000001e-28  Pseudomonas putida GB-1  Bacteria  normal  0.791848  normal 
 
 
-
 
NC_007951  Bxe_A2492  ABC aliphatic sulfonates transporter, innermembrane subunit  37.39 
 
 
280 aa  127  1.0000000000000001e-28  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.773133 
 
 
-
 
NC_004578  PSPTO_2787  ABC transporter, permease protein  32.26 
 
 
282 aa  127  2.0000000000000002e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0328614  n/a   
 
 
-
 
NC_007333  Tfu_1692  putative ABC transporter membrane protein  31.33 
 
 
281 aa  127  2.0000000000000002e-28  Thermobifida fusca YX  Bacteria  hitchhiker  0.00465779  n/a   
 
 
-
 
NC_007005  Psyr_2515  binding-protein dependent transport system inner membrane protein  31.85 
 
 
282 aa  126  4.0000000000000003e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.313862  normal 
 
 
-
 
NC_009801  EcE24377A_0391  taurine transporter subunit  32.53 
 
 
275 aa  126  4.0000000000000003e-28  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1557  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
272 aa  126  4.0000000000000003e-28  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.00127239  hitchhiker  0.00240392 
 
 
-
 
NC_005945  BAS2712  sulfonate ABC transporter permease  30.57 
 
 
282 aa  125  5e-28  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2920  sulfonate ABC transporter permease protein  30.57 
 
 
282 aa  125  5e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4895  binding-protein-dependent transport systems inner membrane component  32.67 
 
 
251 aa  125  5e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
265 aa  125  5e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3884  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
258 aa  125  6e-28  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1745  binding-protein-dependent transport systems inner membrane component  38.07 
 
 
280 aa  125  6e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  34.02 
 
 
290 aa  125  6e-28  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0442  taurine transporter subunit  32.13 
 
 
275 aa  125  7e-28  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0030  binding-protein-dependent transport systems inner membrane component  37.22 
 
 
264 aa  125  7e-28  Pectobacterium wasabiae WPP163  Bacteria  normal  0.050552  n/a   
 
 
-
 
CP001509  ECD_00317  taurine transporter subunit  31.73 
 
 
275 aa  125  8.000000000000001e-28  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  30.2 
 
 
279 aa  125  8.000000000000001e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_010468  EcolC_3261  taurine transporter subunit  31.73 
 
 
275 aa  125  8.000000000000001e-28  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0154  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
264 aa  125  8.000000000000001e-28  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00321  hypothetical protein  31.73 
 
 
275 aa  125  8.000000000000001e-28  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2511  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
266 aa  125  9e-28  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3159  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
293 aa  125  9e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_2959  sulfonate ABC transporter, permease protein, putative  29.6 
 
 
284 aa  124  1e-27  Bacillus cereus ATCC 10987  Bacteria  normal  0.132224  n/a   
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  30.17 
 
 
255 aa  124  1e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_012917  PC1_0024  binding-protein-dependent transport systems inner membrane component  35.86 
 
 
264 aa  124  2e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2919  putative sulfonate ABC transporter, permease protein  29.6 
 
 
282 aa  123  2e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.35916e-18 
 
 
-
 
NC_011884  Cyan7425_3255  binding-protein-dependent transport systems inner membrane component  32.93 
 
 
294 aa  124  2e-27  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.106321 
 
 
-
 
NC_011757  Mchl_4847  binding-protein-dependent transport systems inner membrane component  36.6 
 
 
250 aa  123  3e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
256 aa  123  3e-27  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4371  binding-protein-dependent transport systems inner membrane component  36.6 
 
 
250 aa  123  3e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.249078 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  31.96 
 
 
267 aa  123  3e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3642  binding-protein-dependent transport systems inner membrane component  35.05 
 
 
275 aa  123  3e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.142025  normal 
 
 
-
 
NC_010658  SbBS512_E0280  taurine transporter subunit  32.13 
 
 
275 aa  122  5e-27  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5412  binding-protein dependent transport system inner membrane protein  35.06 
 
 
260 aa  122  5e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.210037  hitchhiker  0.00191971 
 
 
-
 
NC_008463  PA14_19570  ABC transporter permease  34.44 
 
 
262 aa  122  5e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A0431  taurine transporter subunit  32.13 
 
 
275 aa  122  5e-27  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3240  binding-protein-dependent transport systems inner membrane component  30.92 
 
 
275 aa  122  6e-27  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0396  taurine transporter subunit  31.73 
 
 
275 aa  122  6e-27  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2846  binding-protein-dependent transport systems inner membrane component  31.9 
 
 
260 aa  121  8e-27  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000143494  n/a   
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  30.92 
 
 
273 aa  121  9.999999999999999e-27  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3478  binding-protein-dependent transport systems inner membrane component  34.19 
 
 
291 aa  121  9.999999999999999e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  0.466071  n/a   
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  30.92 
 
 
273 aa  121  9.999999999999999e-27  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1402  binding-protein-dependent transport systems inner membrane component  33.64 
 
 
257 aa  121  9.999999999999999e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1453  alkanesulfonate transporter permease subunit  34.4 
 
 
263 aa  121  9.999999999999999e-27  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
278 aa  121  9.999999999999999e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_009656  PSPA7_1684  ABC transporter permease  34.44 
 
 
262 aa  121  9.999999999999999e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7221  ABC transporter membrane spanning protein (nitrate/sulfonates)  32.54 
 
 
282 aa  121  9.999999999999999e-27  Agrobacterium vitis S4  Bacteria  normal  0.735165  n/a   
 
 
-
 
NC_007347  Reut_A2719  binding-protein dependent transport system inner membrane protein  32.19 
 
 
284 aa  120  1.9999999999999998e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4139  binding-protein dependent transport system inner membrane protein  34.05 
 
 
275 aa  120  1.9999999999999998e-26  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000000314222  normal  0.0106036 
 
 
-
 
NC_007650  BTH_II0802  taurine ABC transporter, permease protein  31.76 
 
 
283 aa  120  1.9999999999999998e-26  Burkholderia thailandensis E264  Bacteria  normal  0.207449  n/a   
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
280 aa  120  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_009720  Xaut_3464  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
294 aa  120  1.9999999999999998e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  0.136656  normal 
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
254 aa  120  1.9999999999999998e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_010172  Mext_0332  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
279 aa  120  3e-26  Methylobacterium extorquens PA1  Bacteria  normal  0.692278  normal 
 
 
-
 
NC_008781  Pnap_0040  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
259 aa  120  3e-26  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.832577  normal  0.34867 
 
 
-
 
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